Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.84■□□□□ 0.93
SSC5DA1L4H1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SSC5DA1L4H1 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SSC5DA1L4H1 CALY-203ENST00000368558 825 ntTSL 5 BASIC20.84■□□□□ 0.93
SSC5DA1L4H1 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.84■□□□□ 0.93
SSC5DA1L4H1 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SSC5DA1L4H1 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SSC5DA1L4H1 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SSC5DA1L4H1 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.84■□□□□ 0.93
SSC5DA1L4H1 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.84■□□□□ 0.93
SSC5DA1L4H1 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SSC5DA1L4H1 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.84■□□□□ 0.93
SSC5DA1L4H1 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SSC5DA1L4H1 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SSC5DA1L4H1 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.84■□□□□ 0.93
SSC5DA1L4H1 AL805961.1-202ENST00000641562 540 ntBASIC20.84■□□□□ 0.93
SSC5DA1L4H1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SSC5DA1L4H1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SSC5DA1L4H1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SSC5DA1L4H1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SSC5DA1L4H1 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SSC5DA1L4H1 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SSC5DA1L4H1 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
SSC5DA1L4H1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SSC5DA1L4H1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SSC5DA1L4H1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SSC5DA1L4H1 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
SSC5DA1L4H1 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
SSC5DA1L4H1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SSC5DA1L4H1 COX5BP2-201ENST00000392354 334 ntBASIC20.83■□□□□ 0.92
SSC5DA1L4H1 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.83■□□□□ 0.92
SSC5DA1L4H1 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC20.83■□□□□ 0.92
SSC5DA1L4H1 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.83■□□□□ 0.92
SSC5DA1L4H1 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.83■□□□□ 0.92
SSC5DA1L4H1 AC103564.2-201ENST00000432853 1299 ntBASIC20.83■□□□□ 0.92
SSC5DA1L4H1 PRSS29P-201ENST00000440800 595 ntBASIC20.83■□□□□ 0.92
SSC5DA1L4H1 AP002472.1-201ENST00000577490 586 ntBASIC20.83■□□□□ 0.92
SSC5DA1L4H1 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.83■□□□□ 0.92
SSC5DA1L4H1 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.83■□□□□ 0.92
SSC5DA1L4H1 AC106028.4-201ENST00000614509 607 ntBASIC20.83■□□□□ 0.92
SSC5DA1L4H1 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SSC5DA1L4H1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SSC5DA1L4H1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
SSC5DA1L4H1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.83■□□□□ 0.92
SSC5DA1L4H1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.82■□□□□ 0.92
SSC5DA1L4H1 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSC5DA1L4H1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.82■□□□□ 0.92
SSC5DA1L4H1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.82■□□□□ 0.92
SSC5DA1L4H1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
SSC5DA1L4H1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSC5DA1L4H1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSC5DA1L4H1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SSC5DA1L4H1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSC5DA1L4H1 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SSC5DA1L4H1 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSC5DA1L4H1 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.82■□□□□ 0.92
SSC5DA1L4H1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.82■□□□□ 0.92
SSC5DA1L4H1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.82■□□□□ 0.92
SSC5DA1L4H1 AC010654.1-201ENST00000615722 808 ntBASIC20.82■□□□□ 0.92
SSC5DA1L4H1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSC5DA1L4H1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSC5DA1L4H1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
SSC5DA1L4H1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SSC5DA1L4H1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SSC5DA1L4H1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
SSC5DA1L4H1 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.82■□□□□ 0.92
SSC5DA1L4H1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSC5DA1L4H1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.82■□□□□ 0.92
SSC5DA1L4H1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSC5DA1L4H1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSC5DA1L4H1 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SSC5DA1L4H1 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSC5DA1L4H1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SSC5DA1L4H1 AL645939.2-201ENST00000427340 991 ntBASIC20.81■□□□□ 0.92
SSC5DA1L4H1 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.81■□□□□ 0.92
SSC5DA1L4H1 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.81■□□□□ 0.92
SSC5DA1L4H1 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.81■□□□□ 0.92
SSC5DA1L4H1 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.81■□□□□ 0.92
SSC5DA1L4H1 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.81■□□□□ 0.92
SSC5DA1L4H1 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.81■□□□□ 0.92
SSC5DA1L4H1 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.81■□□□□ 0.92
SSC5DA1L4H1 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
SSC5DA1L4H1 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.81■□□□□ 0.92
SSC5DA1L4H1 PHGDH-209ENST00000641074 1780 ntBASIC20.81■□□□□ 0.92
SSC5DA1L4H1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSC5DA1L4H1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.81■□□□□ 0.92
SSC5DA1L4H1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSC5DA1L4H1 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SSC5DA1L4H1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SSC5DA1L4H1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSC5DA1L4H1 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.81■□□□□ 0.92
SSC5DA1L4H1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SSC5DA1L4H1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.81■□□□□ 0.92
SSC5DA1L4H1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSC5DA1L4H1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSC5DA1L4H1 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.8■□□□□ 0.92
SSC5DA1L4H1 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.8■□□□□ 0.92
SSC5DA1L4H1 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.8■□□□□ 0.92
SSC5DA1L4H1 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.8■□□□□ 0.92
SSC5DA1L4H1 OR7E47P-204ENST00000575924 449 ntBASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms