Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CCDC187A0A096LP49 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC187A0A096LP49 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC187A0A096LP49 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CCDC187A0A096LP49 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC187A0A096LP49 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17■□□□□ 0.31
CCDC187A0A096LP49 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17■□□□□ 0.31
CCDC187A0A096LP49 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC187A0A096LP49 AC079776.2-201ENST00000641154 1609 ntBASIC17■□□□□ 0.31
CCDC187A0A096LP49 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC187A0A096LP49 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
CCDC187A0A096LP49 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CCDC187A0A096LP49 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17■□□□□ 0.31
CCDC187A0A096LP49 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC187A0A096LP49 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC187A0A096LP49 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC187A0A096LP49 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC187A0A096LP49 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC187A0A096LP49 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC187A0A096LP49 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CCDC187A0A096LP49 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17■□□□□ 0.31
CCDC187A0A096LP49 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17■□□□□ 0.31
CCDC187A0A096LP49 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17■□□□□ 0.31
CCDC187A0A096LP49 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CCDC187A0A096LP49 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC187A0A096LP49 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17■□□□□ 0.31
CCDC187A0A096LP49 AC002347.1-201ENST00000569543 541 ntBASIC17■□□□□ 0.31
CCDC187A0A096LP49 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC187A0A096LP49 AP001160.2-201ENST00000596071 487 ntBASIC17■□□□□ 0.31
CCDC187A0A096LP49 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CCDC187A0A096LP49 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17■□□□□ 0.31
CCDC187A0A096LP49 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17■□□□□ 0.31
CCDC187A0A096LP49 PGM5P2-202ENST00000637225 1043 ntBASIC17■□□□□ 0.31
CCDC187A0A096LP49 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CCDC187A0A096LP49 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
CCDC187A0A096LP49 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CCDC187A0A096LP49 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC187A0A096LP49 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC187A0A096LP49 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC187A0A096LP49 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 AC004832.2-201ENST00000426397 482 ntBASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 AC007967.2-201ENST00000432613 625 ntBASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 AC004967.1-201ENST00000453589 447 ntBASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 BX005266.1-201ENST00000473402 457 ntBASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 AC112482.1-201ENST00000492080 688 ntBASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 AC006557.2-201ENST00000592985 1240 ntBASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC187A0A096LP49 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC187A0A096LP49 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CCDC187A0A096LP49 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC187A0A096LP49 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC187A0A096LP49 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC187A0A096LP49 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CCDC187A0A096LP49 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.98■□□□□ 0.31
CCDC187A0A096LP49 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.98■□□□□ 0.31
CCDC187A0A096LP49 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC187A0A096LP49 RPS8P6-201ENST00000426177 609 ntBASIC16.98■□□□□ 0.31
CCDC187A0A096LP49 AC009947.1-201ENST00000444350 727 ntBASIC16.98■□□□□ 0.31
CCDC187A0A096LP49 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC187A0A096LP49 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC187A0A096LP49 AL139424.1-201ENST00000607572 797 ntBASIC16.98■□□□□ 0.31
CCDC187A0A096LP49 AC005593.1-201ENST00000624894 515 ntBASIC16.98■□□□□ 0.31
CCDC187A0A096LP49 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC187A0A096LP49 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC187A0A096LP49 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CCDC187A0A096LP49 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CCDC187A0A096LP49 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms