Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC27.04■■□□□ 1.92
CDC42BPBQ9Y5S2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CDC42BPBQ9Y5S2 AC126763.1-201ENST00000552015 2118 ntBASIC27.04■■□□□ 1.92
CDC42BPBQ9Y5S2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC27.04■■□□□ 1.92
CDC42BPBQ9Y5S2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CDC42BPBQ9Y5S2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CDC42BPBQ9Y5S2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CDC42BPBQ9Y5S2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC27.04■■□□□ 1.92
CDC42BPBQ9Y5S2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CDC42BPBQ9Y5S2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CDC42BPBQ9Y5S2 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CDC42BPBQ9Y5S2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
CDC42BPBQ9Y5S2 RPL28-205ENST00000558131 444 ntTSL 5 BASIC27.04■■□□□ 1.92
CDC42BPBQ9Y5S2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC27.04■■□□□ 1.92
CDC42BPBQ9Y5S2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
CDC42BPBQ9Y5S2 AL031598.1-201ENST00000561511 1773 ntBASIC27.03■■□□□ 1.92
CDC42BPBQ9Y5S2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CDC42BPBQ9Y5S2 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
CDC42BPBQ9Y5S2 ADH5P3-201ENST00000433842 1137 ntBASIC27.03■■□□□ 1.92
CDC42BPBQ9Y5S2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC27.03■■□□□ 1.92
CDC42BPBQ9Y5S2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
CDC42BPBQ9Y5S2 IGHV3-65-201ENST00000523210 341 ntBASIC27.03■■□□□ 1.92
CDC42BPBQ9Y5S2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC27.03■■□□□ 1.92
CDC42BPBQ9Y5S2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC27.03■■□□□ 1.92
CDC42BPBQ9Y5S2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC27.03■■□□□ 1.92
CDC42BPBQ9Y5S2 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC27.03■■□□□ 1.92
CDC42BPBQ9Y5S2 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
CDC42BPBQ9Y5S2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC27.03■■□□□ 1.92
CDC42BPBQ9Y5S2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC27.03■■□□□ 1.92
CDC42BPBQ9Y5S2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
CDC42BPBQ9Y5S2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
CDC42BPBQ9Y5S2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC27.02■■□□□ 1.92
CDC42BPBQ9Y5S2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDC42BPBQ9Y5S2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDC42BPBQ9Y5S2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDC42BPBQ9Y5S2 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CDC42BPBQ9Y5S2 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDC42BPBQ9Y5S2 CNN2P11-201ENST00000429351 262 ntBASIC27.02■■□□□ 1.92
CDC42BPBQ9Y5S2 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC27.02■■□□□ 1.92
CDC42BPBQ9Y5S2 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC27.02■■□□□ 1.92
CDC42BPBQ9Y5S2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC27.02■■□□□ 1.92
CDC42BPBQ9Y5S2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDC42BPBQ9Y5S2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC27.02■■□□□ 1.92
CDC42BPBQ9Y5S2 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDC42BPBQ9Y5S2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDC42BPBQ9Y5S2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDC42BPBQ9Y5S2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC27.02■■□□□ 1.92
CDC42BPBQ9Y5S2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDC42BPBQ9Y5S2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDC42BPBQ9Y5S2 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC27.02■■□□□ 1.92
CDC42BPBQ9Y5S2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDC42BPBQ9Y5S2 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC27.02■■□□□ 1.92
CDC42BPBQ9Y5S2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CDC42BPBQ9Y5S2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CDC42BPBQ9Y5S2 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC27.02■■□□□ 1.92
CDC42BPBQ9Y5S2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC27.02■■□□□ 1.92
CDC42BPBQ9Y5S2 ORC5-208ENST00000626700 344 ntTSL 3 BASIC27.02■■□□□ 1.92
CDC42BPBQ9Y5S2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
CDC42BPBQ9Y5S2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC27.01■■□□□ 1.92
CDC42BPBQ9Y5S2 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC27.01■■□□□ 1.91
CDC42BPBQ9Y5S2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
CDC42BPBQ9Y5S2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CDC42BPBQ9Y5S2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
CDC42BPBQ9Y5S2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC27.01■■□□□ 1.91
CDC42BPBQ9Y5S2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC27.01■■□□□ 1.91
CDC42BPBQ9Y5S2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC27.01■■□□□ 1.91
CDC42BPBQ9Y5S2 AL049757.1-201ENST00000616842 1596 ntBASIC27.01■■□□□ 1.91
CDC42BPBQ9Y5S2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CDC42BPBQ9Y5S2 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC27.01■■□□□ 1.91
CDC42BPBQ9Y5S2 PON3-203ENST00000427422 894 ntTSL 3 BASIC27.01■■□□□ 1.91
CDC42BPBQ9Y5S2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC27.01■■□□□ 1.91
CDC42BPBQ9Y5S2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC27.01■■□□□ 1.91
CDC42BPBQ9Y5S2 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CDC42BPBQ9Y5S2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CDC42BPBQ9Y5S2 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC27.01■■□□□ 1.91
CDC42BPBQ9Y5S2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CDC42BPBQ9Y5S2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC27■■□□□ 1.91
CDC42BPBQ9Y5S2 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
CDC42BPBQ9Y5S2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC27■■□□□ 1.91
CDC42BPBQ9Y5S2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC27■■□□□ 1.91
CDC42BPBQ9Y5S2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CDC42BPBQ9Y5S2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC27■■□□□ 1.91
CDC42BPBQ9Y5S2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC27■■□□□ 1.91
CDC42BPBQ9Y5S2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC27■■□□□ 1.91
CDC42BPBQ9Y5S2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC27■■□□□ 1.91
CDC42BPBQ9Y5S2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC27■■□□□ 1.91
CDC42BPBQ9Y5S2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CDC42BPBQ9Y5S2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC27■■□□□ 1.91
CDC42BPBQ9Y5S2 KRT18P28-201ENST00000453838 1332 ntBASIC27■■□□□ 1.91
CDC42BPBQ9Y5S2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CDC42BPBQ9Y5S2 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC27■■□□□ 1.91
CDC42BPBQ9Y5S2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CDC42BPBQ9Y5S2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC27■■□□□ 1.91
CDC42BPBQ9Y5S2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
CDC42BPBQ9Y5S2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC26.99■■□□□ 1.91
CDC42BPBQ9Y5S2 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
CDC42BPBQ9Y5S2 AP000344.2-201ENST00000512987 629 ntBASIC26.99■■□□□ 1.91
CDC42BPBQ9Y5S2 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC26.99■■□□□ 1.91
CDC42BPBQ9Y5S2 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC26.99■■□□□ 1.91
CDC42BPBQ9Y5S2 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC26.99■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms