Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CLDN16Q9Y5I7 AC096633.1-201ENST00000422446 749 ntBASIC16.74■□□□□ 0.27
CLDN16Q9Y5I7 DUSP5P1-201ENST00000441325 1139 ntBASIC16.74■□□□□ 0.27
CLDN16Q9Y5I7 NUS1P1-201ENST00000446295 882 ntBASIC16.74■□□□□ 0.27
CLDN16Q9Y5I7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN16Q9Y5I7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN16Q9Y5I7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN16Q9Y5I7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.74■□□□□ 0.27
CLDN16Q9Y5I7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.74■□□□□ 0.27
CLDN16Q9Y5I7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.74■□□□□ 0.27
CLDN16Q9Y5I7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CLDN16Q9Y5I7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN16Q9Y5I7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN16Q9Y5I7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
CLDN16Q9Y5I7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CLDN16Q9Y5I7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CLDN16Q9Y5I7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CLDN16Q9Y5I7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN16Q9Y5I7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN16Q9Y5I7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN16Q9Y5I7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.73■□□□□ 0.27
CLDN16Q9Y5I7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN16Q9Y5I7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN16Q9Y5I7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN16Q9Y5I7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CLDN16Q9Y5I7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.73■□□□□ 0.27
CLDN16Q9Y5I7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN16Q9Y5I7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN16Q9Y5I7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN16Q9Y5I7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN16Q9Y5I7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CLDN16Q9Y5I7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN16Q9Y5I7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CLDN16Q9Y5I7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CLDN16Q9Y5I7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.73■□□□□ 0.27
CLDN16Q9Y5I7 MIR3652-201ENST00000579335 131 ntBASIC16.73■□□□□ 0.27
CLDN16Q9Y5I7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.73■□□□□ 0.27
CLDN16Q9Y5I7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CLDN16Q9Y5I7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN16Q9Y5I7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN16Q9Y5I7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
CLDN16Q9Y5I7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN16Q9Y5I7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 AC097374.2-201ENST00000618617 1306 ntBASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 AC007613.1-201ENST00000572811 2597 ntBASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 VENTXP7-201ENST00000475503 772 ntBASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 AC104819.1-201ENST00000504587 486 ntBASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN16Q9Y5I7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms