Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGA4Q9Y5G9 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGA4Q9Y5G9 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGA4Q9Y5G9 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGA4Q9Y5G9 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA4Q9Y5G9 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA4Q9Y5G9 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA4Q9Y5G9 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA4Q9Y5G9 HBZP1-201ENST00000354915 429 ntBASIC17.83■□□□□ 0.44
PCDHGA4Q9Y5G9 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA4Q9Y5G9 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHGA4Q9Y5G9 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA4Q9Y5G9 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDHGA4Q9Y5G9 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
PCDHGA4Q9Y5G9 AC092329.2-201ENST00000598402 547 ntBASIC17.83■□□□□ 0.44
PCDHGA4Q9Y5G9 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA4Q9Y5G9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHGA4Q9Y5G9 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA4Q9Y5G9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA4Q9Y5G9 LINC01126-201ENST00000623515 1646 ntBASIC17.83■□□□□ 0.44
PCDHGA4Q9Y5G9 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA4Q9Y5G9 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 KRT18P41-201ENST00000518924 1277 ntBASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA4Q9Y5G9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 HOXB1-202ENST00000577092 1414 ntBASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 AC111152.3-201ENST00000569699 673 ntBASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGA4Q9Y5G9 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms