Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SYNPO2Q9UMS6 AL022342.1-201ENST00000400363 863 ntBASIC20.68■□□□□ 0.9
SYNPO2Q9UMS6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.68■□□□□ 0.9
SYNPO2Q9UMS6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SYNPO2Q9UMS6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNPO2Q9UMS6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SYNPO2Q9UMS6 FAM215A-202ENST00000632077 792 ntBASIC20.68■□□□□ 0.9
SYNPO2Q9UMS6 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNPO2Q9UMS6 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNPO2Q9UMS6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.68■□□□□ 0.9
SYNPO2Q9UMS6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.68■□□□□ 0.9
SYNPO2Q9UMS6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SYNPO2Q9UMS6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SYNPO2Q9UMS6 AL353593.2-201ENST00000602529 1483 ntBASIC20.68■□□□□ 0.9
SYNPO2Q9UMS6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNPO2Q9UMS6 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
SYNPO2Q9UMS6 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SYNPO2Q9UMS6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYNPO2Q9UMS6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.67■□□□□ 0.9
SYNPO2Q9UMS6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SYNPO2Q9UMS6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYNPO2Q9UMS6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.67■□□□□ 0.9
SYNPO2Q9UMS6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SYNPO2Q9UMS6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYNPO2Q9UMS6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYNPO2Q9UMS6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.67■□□□□ 0.9
SYNPO2Q9UMS6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.67■□□□□ 0.9
SYNPO2Q9UMS6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.67■□□□□ 0.9
SYNPO2Q9UMS6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.67■□□□□ 0.9
SYNPO2Q9UMS6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SYNPO2Q9UMS6 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.67■□□□□ 0.9
SYNPO2Q9UMS6 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SYNPO2Q9UMS6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYNPO2Q9UMS6 AC090164.3-201ENST00000610780 2143 ntBASIC20.67■□□□□ 0.9
SYNPO2Q9UMS6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYNPO2Q9UMS6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYNPO2Q9UMS6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYNPO2Q9UMS6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SYNPO2Q9UMS6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYNPO2Q9UMS6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SYNPO2Q9UMS6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYNPO2Q9UMS6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.67■□□□□ 0.9
SYNPO2Q9UMS6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SYNPO2Q9UMS6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNPO2Q9UMS6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SYNPO2Q9UMS6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SYNPO2Q9UMS6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNPO2Q9UMS6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.66■□□□□ 0.9
SYNPO2Q9UMS6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SYNPO2Q9UMS6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNPO2Q9UMS6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNPO2Q9UMS6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
SYNPO2Q9UMS6 AC025062.2-201ENST00000605477 670 ntBASIC20.66■□□□□ 0.9
SYNPO2Q9UMS6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.66■□□□□ 0.9
SYNPO2Q9UMS6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.66■□□□□ 0.9
SYNPO2Q9UMS6 MIR7706-201ENST00000613747 67 ntBASIC20.66■□□□□ 0.9
SYNPO2Q9UMS6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.66■□□□□ 0.9
SYNPO2Q9UMS6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SYNPO2Q9UMS6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNPO2Q9UMS6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SYNPO2Q9UMS6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.66■□□□□ 0.9
SYNPO2Q9UMS6 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.66■□□□□ 0.9
SYNPO2Q9UMS6 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNPO2Q9UMS6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.66■□□□□ 0.9
SYNPO2Q9UMS6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNPO2Q9UMS6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNPO2Q9UMS6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNPO2Q9UMS6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.66■□□□□ 0.9
SYNPO2Q9UMS6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.66■□□□□ 0.9
SYNPO2Q9UMS6 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SYNPO2Q9UMS6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 FLJ13224-201ENST00000313737 1514 ntBASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 AP000347.1-202ENST00000435868 847 ntBASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 HNRNPDP1-201ENST00000439535 754 ntBASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms