Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSFQ9UBX1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSFQ9UBX1 AC020763.4-201ENST00000623414 4170 ntBASIC16.93■□□□□ 0.3
CTSFQ9UBX1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSFQ9UBX1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSFQ9UBX1 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.93■□□□□ 0.3
CTSFQ9UBX1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CTSFQ9UBX1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CTSFQ9UBX1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTSFQ9UBX1 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
CTSFQ9UBX1 FAAHP1-202ENST00000446499 1238 ntBASIC16.93■□□□□ 0.3
CTSFQ9UBX1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CTSFQ9UBX1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSFQ9UBX1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.93■□□□□ 0.3
CTSFQ9UBX1 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.93■□□□□ 0.3
CTSFQ9UBX1 AC114341.1-201ENST00000618070 349 ntBASIC16.93■□□□□ 0.3
CTSFQ9UBX1 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.93■□□□□ 0.3
CTSFQ9UBX1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSFQ9UBX1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CTSFQ9UBX1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSFQ9UBX1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.93■□□□□ 0.3
CTSFQ9UBX1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CTSFQ9UBX1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSFQ9UBX1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.93■□□□□ 0.3
CTSFQ9UBX1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTSFQ9UBX1 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTSFQ9UBX1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTSFQ9UBX1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTSFQ9UBX1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CTSFQ9UBX1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.92■□□□□ 0.3
CTSFQ9UBX1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTSFQ9UBX1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTSFQ9UBX1 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTSFQ9UBX1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTSFQ9UBX1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTSFQ9UBX1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTSFQ9UBX1 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.92■□□□□ 0.3
CTSFQ9UBX1 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
CTSFQ9UBX1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.92■□□□□ 0.3
CTSFQ9UBX1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.92■□□□□ 0.3
CTSFQ9UBX1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.92■□□□□ 0.3
CTSFQ9UBX1 KRT16P4-201ENST00000453883 522 ntBASIC16.92■□□□□ 0.3
CTSFQ9UBX1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.92■□□□□ 0.3
CTSFQ9UBX1 AC112698.1-201ENST00000510299 916 ntBASIC16.92■□□□□ 0.3
CTSFQ9UBX1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.92■□□□□ 0.3
CTSFQ9UBX1 AL031008.1-201ENST00000619963 541 ntBASIC16.92■□□□□ 0.3
CTSFQ9UBX1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.92■□□□□ 0.3
CTSFQ9UBX1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTSFQ9UBX1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTSFQ9UBX1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTSFQ9UBX1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.92■□□□□ 0.3
CTSFQ9UBX1 AC093010.1-201ENST00000473625 1624 ntBASIC16.92■□□□□ 0.3
CTSFQ9UBX1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTSFQ9UBX1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.92■□□□□ 0.3
CTSFQ9UBX1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTSFQ9UBX1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTSFQ9UBX1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 AL138781.2-201ENST00000617896 1843 ntBASIC16.91■□□□□ 0.3
CTSFQ9UBX1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 AKR1C7P-201ENST00000305623 895 ntBASIC16.91■□□□□ 0.3
CTSFQ9UBX1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 POM121L3P-201ENST00000419331 1163 ntBASIC16.91■□□□□ 0.3
CTSFQ9UBX1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 AC079781.3-201ENST00000449110 356 ntBASIC16.91■□□□□ 0.3
CTSFQ9UBX1 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.91■□□□□ 0.3
CTSFQ9UBX1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms