Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 AL645929.1-201ENST00000420084 975 ntBASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PPARGC1AQ9UBK2 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 AC020916.1-201ENST00000587762 1774 ntBASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PPARGC1AQ9UBK2 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PPARGC1AQ9UBK2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.77■□□□□ 0.6
PPARGC1AQ9UBK2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PPARGC1AQ9UBK2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PPARGC1AQ9UBK2 AC005332.1-201ENST00000577698 1310 ntBASIC18.77■□□□□ 0.6
PPARGC1AQ9UBK2 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PPARGC1AQ9UBK2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PPARGC1AQ9UBK2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PPARGC1AQ9UBK2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PPARGC1AQ9UBK2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PPARGC1AQ9UBK2 OR6D1P-202ENST00000641007 5290 ntBASIC18.77■□□□□ 0.6
PPARGC1AQ9UBK2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.77■□□□□ 0.6
PPARGC1AQ9UBK2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PPARGC1AQ9UBK2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PPARGC1AQ9UBK2 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.77■□□□□ 0.6
PPARGC1AQ9UBK2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PPARGC1AQ9UBK2 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.77■□□□□ 0.6
PPARGC1AQ9UBK2 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.77■□□□□ 0.6
PPARGC1AQ9UBK2 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.77■□□□□ 0.6
PPARGC1AQ9UBK2 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PPARGC1AQ9UBK2 AP003733.1-201ENST00000491725 852 ntBASIC18.77■□□□□ 0.6
PPARGC1AQ9UBK2 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.77■□□□□ 0.6
PPARGC1AQ9UBK2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.77■□□□□ 0.6
PPARGC1AQ9UBK2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
PPARGC1AQ9UBK2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PPARGC1AQ9UBK2 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PPARGC1AQ9UBK2 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.77■□□□□ 0.6
PPARGC1AQ9UBK2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
PPARGC1AQ9UBK2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PPARGC1AQ9UBK2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.77■□□□□ 0.59
PPARGC1AQ9UBK2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PPARGC1AQ9UBK2 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.76■□□□□ 0.59
PPARGC1AQ9UBK2 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms