Protein–RNA interactions for Protein: Q9P2B4

CTTNBP2NL, CTTNBP2 N-terminal-like protein, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTTNBP2NLQ9P2B4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTTNBP2NLQ9P2B4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTTNBP2NLQ9P2B4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTTNBP2NLQ9P2B4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.19■□□□□ 0.66
CTTNBP2NLQ9P2B4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.18■□□□□ 0.66
CTTNBP2NLQ9P2B4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTTNBP2NLQ9P2B4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
CTTNBP2NLQ9P2B4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTTNBP2NLQ9P2B4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTTNBP2NLQ9P2B4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTTNBP2NLQ9P2B4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.18■□□□□ 0.66
CTTNBP2NLQ9P2B4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.18■□□□□ 0.66
CTTNBP2NLQ9P2B4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CTTNBP2NLQ9P2B4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTTNBP2NLQ9P2B4 ECEL1P2-202ENST00000465689 757 ntBASIC19.18■□□□□ 0.66
CTTNBP2NLQ9P2B4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.18■□□□□ 0.66
CTTNBP2NLQ9P2B4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.18■□□□□ 0.66
CTTNBP2NLQ9P2B4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
CTTNBP2NLQ9P2B4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.18■□□□□ 0.66
CTTNBP2NLQ9P2B4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTTNBP2NLQ9P2B4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.18■□□□□ 0.66
CTTNBP2NLQ9P2B4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.18■□□□□ 0.66
CTTNBP2NLQ9P2B4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTTNBP2NLQ9P2B4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CTTNBP2NLQ9P2B4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.18■□□□□ 0.66
CTTNBP2NLQ9P2B4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTTNBP2NLQ9P2B4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTTNBP2NLQ9P2B4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.18■□□□□ 0.66
CTTNBP2NLQ9P2B4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTTNBP2NLQ9P2B4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CTTNBP2NLQ9P2B4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTTNBP2NLQ9P2B4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 AL512604.3-201ENST00000569583 964 ntBASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 FAM87A-204ENST00000613235 858 ntBASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTTNBP2NLQ9P2B4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTTNBP2NLQ9P2B4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTTNBP2NLQ9P2B4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CTTNBP2NLQ9P2B4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTTNBP2NLQ9P2B4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTTNBP2NLQ9P2B4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.16■□□□□ 0.66
CTTNBP2NLQ9P2B4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.16■□□□□ 0.66
CTTNBP2NLQ9P2B4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTTNBP2NLQ9P2B4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CTTNBP2NLQ9P2B4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.16■□□□□ 0.66
CTTNBP2NLQ9P2B4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CTTNBP2NLQ9P2B4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.16■□□□□ 0.66
CTTNBP2NLQ9P2B4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.16■□□□□ 0.66
CTTNBP2NLQ9P2B4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTTNBP2NLQ9P2B4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CTTNBP2NLQ9P2B4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTTNBP2NLQ9P2B4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTTNBP2NLQ9P2B4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTTNBP2NLQ9P2B4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTTNBP2NLQ9P2B4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.16■□□□□ 0.66
CTTNBP2NLQ9P2B4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTTNBP2NLQ9P2B4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTTNBP2NLQ9P2B4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CTTNBP2NLQ9P2B4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTTNBP2NLQ9P2B4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CTTNBP2NLQ9P2B4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.16■□□□□ 0.66
CTTNBP2NLQ9P2B4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CTTNBP2NLQ9P2B4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CTTNBP2NLQ9P2B4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms