Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HMG20BQ9P0W2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
HMG20BQ9P0W2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HMG20BQ9P0W2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HMG20BQ9P0W2 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HMG20BQ9P0W2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
HMG20BQ9P0W2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HMG20BQ9P0W2 EMBP1-201ENST00000458200 901 ntBASIC21.91■■□□□ 1.1
HMG20BQ9P0W2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.91■■□□□ 1.1
HMG20BQ9P0W2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.91■■□□□ 1.1
HMG20BQ9P0W2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC21.91■■□□□ 1.1
HMG20BQ9P0W2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.91■■□□□ 1.1
HMG20BQ9P0W2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.91■■□□□ 1.1
HMG20BQ9P0W2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.91■■□□□ 1.1
HMG20BQ9P0W2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HMG20BQ9P0W2 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HMG20BQ9P0W2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HMG20BQ9P0W2 AC093010.1-201ENST00000473625 1624 ntBASIC21.91■■□□□ 1.1
HMG20BQ9P0W2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
HMG20BQ9P0W2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HMG20BQ9P0W2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HMG20BQ9P0W2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.91■■□□□ 1.1
HMG20BQ9P0W2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 NOC2LP1-202ENST00000452600 2235 ntBASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HMG20BQ9P0W2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
HMG20BQ9P0W2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.1
HMG20BQ9P0W2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
HMG20BQ9P0W2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.89■■□□□ 1.1
HMG20BQ9P0W2 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
HMG20BQ9P0W2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HMG20BQ9P0W2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HMG20BQ9P0W2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.1
HMG20BQ9P0W2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
HMG20BQ9P0W2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
HMG20BQ9P0W2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
HMG20BQ9P0W2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HMG20BQ9P0W2 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
HMG20BQ9P0W2 NUS1P2-201ENST00000417358 873 ntBASIC21.89■■□□□ 1.09
HMG20BQ9P0W2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.89■■□□□ 1.09
HMG20BQ9P0W2 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.89■■□□□ 1.09
HMG20BQ9P0W2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.89■■□□□ 1.09
HMG20BQ9P0W2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.89■■□□□ 1.09
HMG20BQ9P0W2 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.89■■□□□ 1.09
HMG20BQ9P0W2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.89■■□□□ 1.09
HMG20BQ9P0W2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
HMG20BQ9P0W2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.89■■□□□ 1.09
HMG20BQ9P0W2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HMG20BQ9P0W2 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HMG20BQ9P0W2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.89■■□□□ 1.09
HMG20BQ9P0W2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.89■■□□□ 1.09
HMG20BQ9P0W2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.89■■□□□ 1.09
HMG20BQ9P0W2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HMG20BQ9P0W2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
HMG20BQ9P0W2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
HMG20BQ9P0W2 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HMG20BQ9P0W2 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
HMG20BQ9P0W2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.09
HMG20BQ9P0W2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.89■■□□□ 1.09
HMG20BQ9P0W2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HMG20BQ9P0W2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HMG20BQ9P0W2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HMG20BQ9P0W2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
HMG20BQ9P0W2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
HMG20BQ9P0W2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.88■■□□□ 1.09
HMG20BQ9P0W2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.88■■□□□ 1.09
HMG20BQ9P0W2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HMG20BQ9P0W2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HMG20BQ9P0W2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HMG20BQ9P0W2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HMG20BQ9P0W2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
HMG20BQ9P0W2 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
HMG20BQ9P0W2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms