Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
UBP1Q9NZI7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
UBP1Q9NZI7 HLA-F-220ENST00000434407 884 ntBASIC18.38■□□□□ 0.53
UBP1Q9NZI7 AC063952.2-201ENST00000498792 1227 ntBASIC18.38■□□□□ 0.53
UBP1Q9NZI7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.38■□□□□ 0.53
UBP1Q9NZI7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.38■□□□□ 0.53
UBP1Q9NZI7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.38■□□□□ 0.53
UBP1Q9NZI7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.38■□□□□ 0.53
UBP1Q9NZI7 AC024563.2-201ENST00000603282 481 ntBASIC18.38■□□□□ 0.53
UBP1Q9NZI7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
UBP1Q9NZI7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBP1Q9NZI7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.38■□□□□ 0.53
UBP1Q9NZI7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBP1Q9NZI7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBP1Q9NZI7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.38■□□□□ 0.53
UBP1Q9NZI7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.38■□□□□ 0.53
UBP1Q9NZI7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBP1Q9NZI7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBP1Q9NZI7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBP1Q9NZI7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
UBP1Q9NZI7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBP1Q9NZI7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBP1Q9NZI7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBP1Q9NZI7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBP1Q9NZI7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBP1Q9NZI7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 AC134043.2-201ENST00000624206 2238 ntBASIC18.37■□□□□ 0.53
UBP1Q9NZI7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 AC012317.2-201ENST00000623305 2251 ntBASIC18.37■□□□□ 0.53
UBP1Q9NZI7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBP1Q9NZI7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
UBP1Q9NZI7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBP1Q9NZI7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBP1Q9NZI7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBP1Q9NZI7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBP1Q9NZI7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBP1Q9NZI7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBP1Q9NZI7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBP1Q9NZI7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBP1Q9NZI7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.36■□□□□ 0.53
UBP1Q9NZI7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBP1Q9NZI7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
UBP1Q9NZI7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.36■□□□□ 0.53
UBP1Q9NZI7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBP1Q9NZI7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.36■□□□□ 0.53
UBP1Q9NZI7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
UBP1Q9NZI7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBP1Q9NZI7 FAM8A6P-201ENST00000407496 1135 ntBASIC18.36■□□□□ 0.53
UBP1Q9NZI7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.36■□□□□ 0.53
UBP1Q9NZI7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.36■□□□□ 0.53
UBP1Q9NZI7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBP1Q9NZI7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBP1Q9NZI7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
UBP1Q9NZI7 AC022616.7-201ENST00000525383 220 ntBASIC18.36■□□□□ 0.53
UBP1Q9NZI7 LINC00167-201ENST00000530583 1419 ntBASIC18.36■□□□□ 0.53
UBP1Q9NZI7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.36■□□□□ 0.53
UBP1Q9NZI7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.36■□□□□ 0.53
UBP1Q9NZI7 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.36■□□□□ 0.53
UBP1Q9NZI7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
UBP1Q9NZI7 HYMAI.1-201ENST00000620949 238 ntBASIC18.36■□□□□ 0.53
UBP1Q9NZI7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBP1Q9NZI7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
UBP1Q9NZI7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBP1Q9NZI7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBP1Q9NZI7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms