Protein–RNA interactions for Protein: Q9NZ63

C9orf78, Telomere length and silencing protein 1 homolog, humanhuman

Predicted RBP Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78Q9NZ63 BNIP3P18-201ENST00000593976 575 ntBASIC22.57■■□□□ 1.2
C9orf78Q9NZ63 CCNC-219ENST00000627680 896 ntTSL 5 BASIC22.57■■□□□ 1.2
C9orf78Q9NZ63 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC22.57■■□□□ 1.2
C9orf78Q9NZ63 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
C9orf78Q9NZ63 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
C9orf78Q9NZ63 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
C9orf78Q9NZ63 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
C9orf78Q9NZ63 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC22.57■■□□□ 1.2
C9orf78Q9NZ63 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
C9orf78Q9NZ63 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
C9orf78Q9NZ63 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC22.57■■□□□ 1.2
C9orf78Q9NZ63 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
C9orf78Q9NZ63 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC22.57■■□□□ 1.2
C9orf78Q9NZ63 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
C9orf78Q9NZ63 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
C9orf78Q9NZ63 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
C9orf78Q9NZ63 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
C9orf78Q9NZ63 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC22.56■■□□□ 1.2
C9orf78Q9NZ63 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
C9orf78Q9NZ63 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
C9orf78Q9NZ63 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC22.56■■□□□ 1.2
C9orf78Q9NZ63 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
C9orf78Q9NZ63 AL020996.1-203ENST00000536896 2307 ntBASIC22.56■■□□□ 1.2
C9orf78Q9NZ63 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
C9orf78Q9NZ63 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
C9orf78Q9NZ63 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
C9orf78Q9NZ63 NUS1P2-201ENST00000417358 873 ntBASIC22.56■■□□□ 1.2
C9orf78Q9NZ63 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC22.56■■□□□ 1.2
C9orf78Q9NZ63 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
C9orf78Q9NZ63 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC22.56■■□□□ 1.2
C9orf78Q9NZ63 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
C9orf78Q9NZ63 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
C9orf78Q9NZ63 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
C9orf78Q9NZ63 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
C9orf78Q9NZ63 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
C9orf78Q9NZ63 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
C9orf78Q9NZ63 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC22.56■■□□□ 1.2
C9orf78Q9NZ63 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
C9orf78Q9NZ63 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
C9orf78Q9NZ63 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC22.56■■□□□ 1.2
C9orf78Q9NZ63 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC22.56■■□□□ 1.2
C9orf78Q9NZ63 EFTUD1P1-204ENST00000560401 1798 ntBASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 AC111152.3-201ENST00000569699 673 ntBASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 AL121894.2-201ENST00000602977 491 ntBASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 AL691432.3-201ENST00000621860 400 ntBASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 AC022898.2-201ENST00000616822 1312 ntBASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
C9orf78Q9NZ63 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
C9orf78Q9NZ63 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
C9orf78Q9NZ63 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
C9orf78Q9NZ63 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
C9orf78Q9NZ63 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
C9orf78Q9NZ63 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
C9orf78Q9NZ63 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
C9orf78Q9NZ63 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
C9orf78Q9NZ63 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
C9orf78Q9NZ63 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC22.54■■□□□ 1.2
C9orf78Q9NZ63 POM121L3P-201ENST00000419331 1163 ntBASIC22.54■■□□□ 1.2
C9orf78Q9NZ63 AC096582.2-201ENST00000510860 516 ntBASIC22.54■■□□□ 1.2
C9orf78Q9NZ63 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC22.54■■□□□ 1.2
C9orf78Q9NZ63 AL138831.2-201ENST00000606564 490 ntBASIC22.54■■□□□ 1.2
C9orf78Q9NZ63 IFNL4P1-201ENST00000607083 540 ntBASIC22.54■■□□□ 1.2
C9orf78Q9NZ63 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC22.54■■□□□ 1.2
C9orf78Q9NZ63 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
C9orf78Q9NZ63 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC22.54■■□□□ 1.2
C9orf78Q9NZ63 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
C9orf78Q9NZ63 AC125634.1-201ENST00000438758 1403 ntBASIC22.54■■□□□ 1.2
C9orf78Q9NZ63 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
C9orf78Q9NZ63 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC22.54■■□□□ 1.2
C9orf78Q9NZ63 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
C9orf78Q9NZ63 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
C9orf78Q9NZ63 BCL2-203ENST00000589955 5011 ntBASIC22.54■■□□□ 1.2
C9orf78Q9NZ63 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms