Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
HCFC1R1Q9NWW0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
HCFC1R1Q9NWW0 SLC25A24-204ENST00000569674 2357 ntBASIC18.64■□□□□ 0.58
HCFC1R1Q9NWW0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HCFC1R1Q9NWW0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
HCFC1R1Q9NWW0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC1R1Q9NWW0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC1R1Q9NWW0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HCFC1R1Q9NWW0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC1R1Q9NWW0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC1R1Q9NWW0 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC1R1Q9NWW0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.64■□□□□ 0.57
HCFC1R1Q9NWW0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC1R1Q9NWW0 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.64■□□□□ 0.57
HCFC1R1Q9NWW0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.64■□□□□ 0.57
HCFC1R1Q9NWW0 UNC93B6-202ENST00000528242 690 ntBASIC18.64■□□□□ 0.57
HCFC1R1Q9NWW0 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.64■□□□□ 0.57
HCFC1R1Q9NWW0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.64■□□□□ 0.57
HCFC1R1Q9NWW0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.64■□□□□ 0.57
HCFC1R1Q9NWW0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC1R1Q9NWW0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC1R1Q9NWW0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC1R1Q9NWW0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC1R1Q9NWW0 AC055717.3-201ENST00000622967 595 ntBASIC18.64■□□□□ 0.57
HCFC1R1Q9NWW0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.64■□□□□ 0.57
HCFC1R1Q9NWW0 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.64■□□□□ 0.57
HCFC1R1Q9NWW0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC1R1Q9NWW0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.64■□□□□ 0.57
HCFC1R1Q9NWW0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC1R1Q9NWW0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC1R1Q9NWW0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC1R1Q9NWW0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC1R1Q9NWW0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.64■□□□□ 0.57
HCFC1R1Q9NWW0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.64■□□□□ 0.57
HCFC1R1Q9NWW0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC1R1Q9NWW0 AC079776.2-201ENST00000641154 1609 ntBASIC18.63■□□□□ 0.57
HCFC1R1Q9NWW0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC1R1Q9NWW0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.63■□□□□ 0.57
HCFC1R1Q9NWW0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC1R1Q9NWW0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC1R1Q9NWW0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
HCFC1R1Q9NWW0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC1R1Q9NWW0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC1R1Q9NWW0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
HCFC1R1Q9NWW0 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC1R1Q9NWW0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.63■□□□□ 0.57
HCFC1R1Q9NWW0 AC005104.2-201ENST00000427818 678 ntBASIC18.63■□□□□ 0.57
HCFC1R1Q9NWW0 AC092183.1-201ENST00000469884 875 ntBASIC18.63■□□□□ 0.57
HCFC1R1Q9NWW0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.63■□□□□ 0.57
HCFC1R1Q9NWW0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.63■□□□□ 0.57
HCFC1R1Q9NWW0 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.63■□□□□ 0.57
HCFC1R1Q9NWW0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC1R1Q9NWW0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.63■□□□□ 0.57
HCFC1R1Q9NWW0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.63■□□□□ 0.57
HCFC1R1Q9NWW0 PMPCAP1-201ENST00000508114 1576 ntBASIC18.63■□□□□ 0.57
HCFC1R1Q9NWW0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.63■□□□□ 0.57
HCFC1R1Q9NWW0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.63■□□□□ 0.57
HCFC1R1Q9NWW0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.63■□□□□ 0.57
HCFC1R1Q9NWW0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.63■□□□□ 0.57
HCFC1R1Q9NWW0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC1R1Q9NWW0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC1R1Q9NWW0 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC1R1Q9NWW0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC1R1Q9NWW0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC1R1Q9NWW0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC1R1Q9NWW0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
HCFC1R1Q9NWW0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HCFC1R1Q9NWW0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC1R1Q9NWW0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC1R1Q9NWW0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC1R1Q9NWW0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HCFC1R1Q9NWW0 AC096633.1-201ENST00000422446 749 ntBASIC18.62■□□□□ 0.57
HCFC1R1Q9NWW0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.62■□□□□ 0.57
HCFC1R1Q9NWW0 AC007967.2-201ENST00000432613 625 ntBASIC18.62■□□□□ 0.57
HCFC1R1Q9NWW0 KRT18P3-201ENST00000451602 1288 ntBASIC18.62■□□□□ 0.57
HCFC1R1Q9NWW0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC1R1Q9NWW0 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.62■□□□□ 0.57
HCFC1R1Q9NWW0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC1R1Q9NWW0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC1R1Q9NWW0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.62■□□□□ 0.57
HCFC1R1Q9NWW0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HCFC1R1Q9NWW0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.62■□□□□ 0.57
HCFC1R1Q9NWW0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC1R1Q9NWW0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.62■□□□□ 0.57
HCFC1R1Q9NWW0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC1R1Q9NWW0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC1R1Q9NWW0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.62■□□□□ 0.57
HCFC1R1Q9NWW0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC1R1Q9NWW0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC1R1Q9NWW0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.61■□□□□ 0.57
HCFC1R1Q9NWW0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC1R1Q9NWW0 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC1R1Q9NWW0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC1R1Q9NWW0 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC1R1Q9NWW0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC1R1Q9NWW0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
HCFC1R1Q9NWW0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC1R1Q9NWW0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC1R1Q9NWW0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC1R1Q9NWW0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms