Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
ABCF3Q9NUQ8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.36■□□□□ 0.53
ABCF3Q9NUQ8 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ABCF3Q9NUQ8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ABCF3Q9NUQ8 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ABCF3Q9NUQ8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ABCF3Q9NUQ8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
ABCF3Q9NUQ8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ABCF3Q9NUQ8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
ABCF3Q9NUQ8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.36■□□□□ 0.53
ABCF3Q9NUQ8 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ABCF3Q9NUQ8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.36■□□□□ 0.53
ABCF3Q9NUQ8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ABCF3Q9NUQ8 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.36■□□□□ 0.53
ABCF3Q9NUQ8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ABCF3Q9NUQ8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.36■□□□□ 0.53
ABCF3Q9NUQ8 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.36■□□□□ 0.53
ABCF3Q9NUQ8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.36■□□□□ 0.53
ABCF3Q9NUQ8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.36■□□□□ 0.53
ABCF3Q9NUQ8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ABCF3Q9NUQ8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
ABCF3Q9NUQ8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ABCF3Q9NUQ8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ABCF3Q9NUQ8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ABCF3Q9NUQ8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.35■□□□□ 0.53
ABCF3Q9NUQ8 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ABCF3Q9NUQ8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ABCF3Q9NUQ8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ABCF3Q9NUQ8 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ABCF3Q9NUQ8 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ABCF3Q9NUQ8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
ABCF3Q9NUQ8 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.35■□□□□ 0.53
ABCF3Q9NUQ8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ABCF3Q9NUQ8 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.35■□□□□ 0.53
ABCF3Q9NUQ8 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
ABCF3Q9NUQ8 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ABCF3Q9NUQ8 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ABCF3Q9NUQ8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ABCF3Q9NUQ8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.35■□□□□ 0.53
ABCF3Q9NUQ8 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.35■□□□□ 0.53
ABCF3Q9NUQ8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.35■□□□□ 0.53
ABCF3Q9NUQ8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ABCF3Q9NUQ8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ABCF3Q9NUQ8 DGCR10-201ENST00000609839 495 ntBASIC18.35■□□□□ 0.53
ABCF3Q9NUQ8 AL118508.1-201ENST00000613502 2345 ntBASIC18.35■□□□□ 0.53
ABCF3Q9NUQ8 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.35■□□□□ 0.53
ABCF3Q9NUQ8 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
ABCF3Q9NUQ8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ABCF3Q9NUQ8 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ABCF3Q9NUQ8 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ABCF3Q9NUQ8 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ABCF3Q9NUQ8 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 MTMR9LP-203ENST00000426597 1545 ntBASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms