Protein–RNA interactions for Protein: Q9NUN5

LMBRD1, Probable lysosomal cobalamin transporter, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1Q9NUN5 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LMBRD1Q9NUN5 PCDHA14-201ENST00000506751 2298 ntBASIC20.69■□□□□ 0.9
LMBRD1Q9NUN5 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMBRD1Q9NUN5 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LMBRD1Q9NUN5 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
LMBRD1Q9NUN5 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
LMBRD1Q9NUN5 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.69■□□□□ 0.9
LMBRD1Q9NUN5 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMBRD1Q9NUN5 AL353807.1-201ENST00000427475 662 ntBASIC20.69■□□□□ 0.9
LMBRD1Q9NUN5 KRT18P23-201ENST00000435622 1283 ntBASIC20.69■□□□□ 0.9
LMBRD1Q9NUN5 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LMBRD1Q9NUN5 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.69■□□□□ 0.9
LMBRD1Q9NUN5 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.69■□□□□ 0.9
LMBRD1Q9NUN5 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
LMBRD1Q9NUN5 AF186192.3-201ENST00000583427 947 ntBASIC20.69■□□□□ 0.9
LMBRD1Q9NUN5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.69■□□□□ 0.9
LMBRD1Q9NUN5 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMBRD1Q9NUN5 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMBRD1Q9NUN5 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
LMBRD1Q9NUN5 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMBRD1Q9NUN5 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMBRD1Q9NUN5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LMBRD1Q9NUN5 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMBRD1Q9NUN5 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
LMBRD1Q9NUN5 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMBRD1Q9NUN5 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.69■□□□□ 0.9
LMBRD1Q9NUN5 FSCN1P1-201ENST00000568912 1481 ntBASIC20.69■□□□□ 0.9
LMBRD1Q9NUN5 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LMBRD1Q9NUN5 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMBRD1Q9NUN5 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMBRD1Q9NUN5 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMBRD1Q9NUN5 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.68■□□□□ 0.9
LMBRD1Q9NUN5 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LMBRD1Q9NUN5 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMBRD1Q9NUN5 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMBRD1Q9NUN5 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LMBRD1Q9NUN5 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMBRD1Q9NUN5 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMBRD1Q9NUN5 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.68■□□□□ 0.9
LMBRD1Q9NUN5 AC073195.1-201ENST00000607241 877 ntBASIC20.68■□□□□ 0.9
LMBRD1Q9NUN5 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
LMBRD1Q9NUN5 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMBRD1Q9NUN5 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMBRD1Q9NUN5 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMBRD1Q9NUN5 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.68■□□□□ 0.9
LMBRD1Q9NUN5 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.68■□□□□ 0.9
LMBRD1Q9NUN5 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.68■□□□□ 0.9
LMBRD1Q9NUN5 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMBRD1Q9NUN5 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
LMBRD1Q9NUN5 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMBRD1Q9NUN5 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.68■□□□□ 0.9
LMBRD1Q9NUN5 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMBRD1Q9NUN5 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMBRD1Q9NUN5 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMBRD1Q9NUN5 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMBRD1Q9NUN5 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LMBRD1Q9NUN5 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMBRD1Q9NUN5 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMBRD1Q9NUN5 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LMBRD1Q9NUN5 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMBRD1Q9NUN5 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
LMBRD1Q9NUN5 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
LMBRD1Q9NUN5 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.67■□□□□ 0.9
LMBRD1Q9NUN5 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMBRD1Q9NUN5 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMBRD1Q9NUN5 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMBRD1Q9NUN5 KRT8P7-201ENST00000533003 1432 ntBASIC20.67■□□□□ 0.9
LMBRD1Q9NUN5 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LMBRD1Q9NUN5 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
LMBRD1Q9NUN5 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMBRD1Q9NUN5 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
LMBRD1Q9NUN5 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
LMBRD1Q9NUN5 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.66■□□□□ 0.9
LMBRD1Q9NUN5 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.66■□□□□ 0.9
LMBRD1Q9NUN5 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LMBRD1Q9NUN5 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LMBRD1Q9NUN5 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LMBRD1Q9NUN5 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
LMBRD1Q9NUN5 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LMBRD1Q9NUN5 MFAP1P1-201ENST00000442257 1255 ntBASIC20.66■□□□□ 0.9
LMBRD1Q9NUN5 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.66■□□□□ 0.9
LMBRD1Q9NUN5 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.66■□□□□ 0.9
LMBRD1Q9NUN5 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
LMBRD1Q9NUN5 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.66■□□□□ 0.9
LMBRD1Q9NUN5 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.66■□□□□ 0.9
LMBRD1Q9NUN5 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LMBRD1Q9NUN5 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
LMBRD1Q9NUN5 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.66■□□□□ 0.9
LMBRD1Q9NUN5 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LMBRD1Q9NUN5 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
LMBRD1Q9NUN5 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LMBRD1Q9NUN5 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC20.66■□□□□ 0.9
LMBRD1Q9NUN5 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LMBRD1Q9NUN5 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LMBRD1Q9NUN5 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
LMBRD1Q9NUN5 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LMBRD1Q9NUN5 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.66■□□□□ 0.9
LMBRD1Q9NUN5 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms