Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 SLC25A3P1-201ENST00000443844 931 ntBASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 AC009947.2-201ENST00000444014 672 ntBASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 AL512604.3-201ENST00000569583 964 ntBASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 FLJ13224-201ENST00000313737 1514 ntBASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CTPS2Q9NRF8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTPS2Q9NRF8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTPS2Q9NRF8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTPS2Q9NRF8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTPS2Q9NRF8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTPS2Q9NRF8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.79■□□□□ 0.28
CTPS2Q9NRF8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.79■□□□□ 0.28
CTPS2Q9NRF8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CTPS2Q9NRF8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTPS2Q9NRF8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTPS2Q9NRF8 MIR149-201ENST00000384879 89 ntBASIC16.79■□□□□ 0.28
CTPS2Q9NRF8 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTPS2Q9NRF8 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CTPS2Q9NRF8 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.79■□□□□ 0.28
CTPS2Q9NRF8 AC012306.2-201ENST00000609350 630 ntBASIC16.79■□□□□ 0.28
CTPS2Q9NRF8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTPS2Q9NRF8 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTPS2Q9NRF8 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTPS2Q9NRF8 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
CTPS2Q9NRF8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTPS2Q9NRF8 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.79■□□□□ 0.28
CTPS2Q9NRF8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.79■□□□□ 0.28
CTPS2Q9NRF8 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CTPS2Q9NRF8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.79■□□□□ 0.28
CTPS2Q9NRF8 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTPS2Q9NRF8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CTPS2Q9NRF8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTPS2Q9NRF8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.79■□□□□ 0.28
CTPS2Q9NRF8 HOXB1-202ENST00000577092 1414 ntBASIC16.79■□□□□ 0.28
CTPS2Q9NRF8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTPS2Q9NRF8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTPS2Q9NRF8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.78■□□□□ 0.28
CTPS2Q9NRF8 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CTPS2Q9NRF8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.78■□□□□ 0.28
CTPS2Q9NRF8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CTPS2Q9NRF8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.78■□□□□ 0.28
CTPS2Q9NRF8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTPS2Q9NRF8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms