Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 DUSP5P1-201ENST00000441325 1139 ntBASIC16.99■□□□□ 0.31
KLHL1Q9NR64 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 AC104390.1-201ENST00000555663 520 ntBASIC16.99■□□□□ 0.31
KLHL1Q9NR64 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 AC012313.10-201ENST00000623509 926 ntBASIC16.99■□□□□ 0.31
KLHL1Q9NR64 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 AC034236.2-201ENST00000606662 1610 ntBASIC16.99■□□□□ 0.31
KLHL1Q9NR64 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 PCDHB18P-201ENST00000524813 2368 ntBASIC16.99■□□□□ 0.31
KLHL1Q9NR64 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.99■□□□□ 0.31
KLHL1Q9NR64 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 KRT8P7-201ENST00000533003 1432 ntBASIC16.98■□□□□ 0.31
KLHL1Q9NR64 HOXB1-202ENST00000577092 1414 ntBASIC16.98■□□□□ 0.31
KLHL1Q9NR64 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 ATP5G2P1-201ENST00000433580 426 ntBASIC16.98■□□□□ 0.31
KLHL1Q9NR64 TSSC2-201ENST00000450217 709 ntBASIC16.98■□□□□ 0.31
KLHL1Q9NR64 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 AL121672.3-201ENST00000608644 468 ntBASIC16.98■□□□□ 0.31
KLHL1Q9NR64 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.98■□□□□ 0.31
KLHL1Q9NR64 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms