Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.1■□□□□ 0.81
PDLIM7Q9NR12 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PDLIM7Q9NR12 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM7Q9NR12 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM7Q9NR12 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM7Q9NR12 AP005117.1-201ENST00000584346 1413 ntBASIC20.1■□□□□ 0.81
PDLIM7Q9NR12 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM7Q9NR12 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.1■□□□□ 0.81
PDLIM7Q9NR12 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDLIM7Q9NR12 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.09■□□□□ 0.81
PDLIM7Q9NR12 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.09■□□□□ 0.81
PDLIM7Q9NR12 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDLIM7Q9NR12 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDLIM7Q9NR12 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDLIM7Q9NR12 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDLIM7Q9NR12 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.09■□□□□ 0.81
PDLIM7Q9NR12 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDLIM7Q9NR12 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.09■□□□□ 0.81
PDLIM7Q9NR12 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.09■□□□□ 0.81
PDLIM7Q9NR12 OR7E14P-202ENST00000530490 1290 ntBASIC20.09■□□□□ 0.81
PDLIM7Q9NR12 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.09■□□□□ 0.81
PDLIM7Q9NR12 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDLIM7Q9NR12 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.09■□□□□ 0.81
PDLIM7Q9NR12 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.09■□□□□ 0.81
PDLIM7Q9NR12 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
PDLIM7Q9NR12 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDLIM7Q9NR12 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDLIM7Q9NR12 AC093677.2-201ENST00000600169 1863 ntBASIC20.09■□□□□ 0.81
PDLIM7Q9NR12 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDLIM7Q9NR12 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PDLIM7Q9NR12 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDLIM7Q9NR12 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.81
PDLIM7Q9NR12 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDLIM7Q9NR12 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.08■□□□□ 0.81
PDLIM7Q9NR12 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDLIM7Q9NR12 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDLIM7Q9NR12 LINC00602-201ENST00000629776 2065 ntBASIC20.08■□□□□ 0.81
PDLIM7Q9NR12 AC132938.6-201ENST00000623828 1655 ntBASIC20.08■□□□□ 0.81
PDLIM7Q9NR12 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
PDLIM7Q9NR12 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDLIM7Q9NR12 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.08■□□□□ 0.81
PDLIM7Q9NR12 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDLIM7Q9NR12 AC009533.2-201ENST00000543664 586 ntBASIC20.08■□□□□ 0.81
PDLIM7Q9NR12 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.08■□□□□ 0.81
PDLIM7Q9NR12 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PDLIM7Q9NR12 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.08■□□□□ 0.81
PDLIM7Q9NR12 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDLIM7Q9NR12 AC025062.2-201ENST00000605477 670 ntBASIC20.08■□□□□ 0.81
PDLIM7Q9NR12 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.08■□□□□ 0.81
PDLIM7Q9NR12 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.08■□□□□ 0.81
PDLIM7Q9NR12 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.08■□□□□ 0.8
PDLIM7Q9NR12 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.08■□□□□ 0.8
PDLIM7Q9NR12 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.08■□□□□ 0.8
PDLIM7Q9NR12 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PDLIM7Q9NR12 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM7Q9NR12 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM7Q9NR12 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.07■□□□□ 0.8
PDLIM7Q9NR12 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM7Q9NR12 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM7Q9NR12 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM7Q9NR12 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM7Q9NR12 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM7Q9NR12 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM7Q9NR12 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.07■□□□□ 0.8
PDLIM7Q9NR12 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.07■□□□□ 0.8
PDLIM7Q9NR12 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.07■□□□□ 0.8
PDLIM7Q9NR12 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PDLIM7Q9NR12 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.07■□□□□ 0.8
PDLIM7Q9NR12 AC068472.1-201ENST00000474589 881 ntBASIC20.07■□□□□ 0.8
PDLIM7Q9NR12 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
PDLIM7Q9NR12 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.07■□□□□ 0.8
PDLIM7Q9NR12 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.07■□□□□ 0.8
PDLIM7Q9NR12 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.07■□□□□ 0.8
PDLIM7Q9NR12 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.07■□□□□ 0.8
PDLIM7Q9NR12 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.07■□□□□ 0.8
PDLIM7Q9NR12 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.07■□□□□ 0.8
PDLIM7Q9NR12 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.07■□□□□ 0.8
PDLIM7Q9NR12 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM7Q9NR12 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM7Q9NR12 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM7Q9NR12 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.07■□□□□ 0.8
PDLIM7Q9NR12 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 AC093010.1-201ENST00000473625 1624 ntBASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms