Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN3Q9NQS3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 LINC01311-201ENST00000565162 1445 ntBASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.3■□□□□ 0.36
NECTIN3Q9NQS3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NECTIN3Q9NQS3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NECTIN3Q9NQS3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NECTIN3Q9NQS3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.29■□□□□ 0.36
NECTIN3Q9NQS3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NECTIN3Q9NQS3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.29■□□□□ 0.36
NECTIN3Q9NQS3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NECTIN3Q9NQS3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NECTIN3Q9NQS3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
NECTIN3Q9NQS3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
NECTIN3Q9NQS3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
NECTIN3Q9NQS3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.29■□□□□ 0.36
NECTIN3Q9NQS3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.29■□□□□ 0.36
NECTIN3Q9NQS3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.29■□□□□ 0.36
NECTIN3Q9NQS3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.29■□□□□ 0.36
NECTIN3Q9NQS3 AC083849.1-201ENST00000615227 514 ntBASIC17.29■□□□□ 0.36
NECTIN3Q9NQS3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NECTIN3Q9NQS3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.29■□□□□ 0.36
NECTIN3Q9NQS3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NECTIN3Q9NQS3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NECTIN3Q9NQS3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
NECTIN3Q9NQS3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NECTIN3Q9NQS3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NECTIN3Q9NQS3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.29■□□□□ 0.36
NECTIN3Q9NQS3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NECTIN3Q9NQS3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NECTIN3Q9NQS3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NECTIN3Q9NQS3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 HBZP1-201ENST00000354915 429 ntBASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 AC126763.1-201ENST00000552015 2118 ntBASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 AL391807.1-203ENST00000604392 2365 ntBASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms