Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HPS4Q9NQG7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HPS4Q9NQG7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HPS4Q9NQG7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HPS4Q9NQG7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HPS4Q9NQG7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HPS4Q9NQG7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HPS4Q9NQG7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HPS4Q9NQG7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HPS4Q9NQG7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HPS4Q9NQG7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HPS4Q9NQG7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HPS4Q9NQG7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HPS4Q9NQG7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HPS4Q9NQG7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HPS4Q9NQG7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HPS4Q9NQG7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HPS4Q9NQG7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.63■□□□□ 0.57
HPS4Q9NQG7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.63■□□□□ 0.57
HPS4Q9NQG7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.63■□□□□ 0.57
HPS4Q9NQG7 SLC25A1P1-201ENST00000528351 927 ntBASIC18.63■□□□□ 0.57
HPS4Q9NQG7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.63■□□□□ 0.57
HPS4Q9NQG7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HPS4Q9NQG7 AF228730.7-201ENST00000641842 219 ntBASIC18.63■□□□□ 0.57
HPS4Q9NQG7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HPS4Q9NQG7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HPS4Q9NQG7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HPS4Q9NQG7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.63■□□□□ 0.57
HPS4Q9NQG7 LINC01126-201ENST00000623515 1646 ntBASIC18.63■□□□□ 0.57
HPS4Q9NQG7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HPS4Q9NQG7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.63■□□□□ 0.57
HPS4Q9NQG7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HPS4Q9NQG7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HPS4Q9NQG7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HPS4Q9NQG7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 LETM1P2-201ENST00000597330 2178 ntBASIC18.62■□□□□ 0.57
HPS4Q9NQG7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 AC093503.3-201ENST00000624917 2352 ntBASIC18.62■□□□□ 0.57
HPS4Q9NQG7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 MTCL1P1-201ENST00000446207 792 ntBASIC18.62■□□□□ 0.57
HPS4Q9NQG7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 AC006538.3-201ENST00000612495 578 ntBASIC18.62■□□□□ 0.57
HPS4Q9NQG7 AC009154.2-201ENST00000621177 724 ntBASIC18.62■□□□□ 0.57
HPS4Q9NQG7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.62■□□□□ 0.57
HPS4Q9NQG7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
HPS4Q9NQG7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPS4Q9NQG7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPS4Q9NQG7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPS4Q9NQG7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
HPS4Q9NQG7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.61■□□□□ 0.57
HPS4Q9NQG7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HPS4Q9NQG7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPS4Q9NQG7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.61■□□□□ 0.57
HPS4Q9NQG7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPS4Q9NQG7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPS4Q9NQG7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPS4Q9NQG7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPS4Q9NQG7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.61■□□□□ 0.57
HPS4Q9NQG7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
HPS4Q9NQG7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPS4Q9NQG7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HPS4Q9NQG7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPS4Q9NQG7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
HPS4Q9NQG7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.61■□□□□ 0.57
HPS4Q9NQG7 AC018712.1-201ENST00000455767 687 ntBASIC18.61■□□□□ 0.57
HPS4Q9NQG7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HPS4Q9NQG7 FGFR3P6-201ENST00000457012 610 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms