Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 MIR3180-3-201ENST00000584616 94 ntBASIC18.95■□□□□ 0.62
CD248Q9HCU0 AC011498.5-201ENST00000592027 486 ntBASIC18.95■□□□□ 0.62
CD248Q9HCU0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD248Q9HCU0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.95■□□□□ 0.62
CD248Q9HCU0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.95■□□□□ 0.62
CD248Q9HCU0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.95■□□□□ 0.62
CD248Q9HCU0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD248Q9HCU0 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD248Q9HCU0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD248Q9HCU0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CD248Q9HCU0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD248Q9HCU0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.95■□□□□ 0.62
CD248Q9HCU0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD248Q9HCU0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.95■□□□□ 0.62
CD248Q9HCU0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CD248Q9HCU0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.95■□□□□ 0.62
CD248Q9HCU0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD248Q9HCU0 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CD248Q9HCU0 AC016734.2-201ENST00000624325 1377 ntBASIC18.94■□□□□ 0.62
CD248Q9HCU0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD248Q9HCU0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD248Q9HCU0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD248Q9HCU0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.94■□□□□ 0.62
CD248Q9HCU0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD248Q9HCU0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD248Q9HCU0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD248Q9HCU0 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD248Q9HCU0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD248Q9HCU0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD248Q9HCU0 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD248Q9HCU0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD248Q9HCU0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD248Q9HCU0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CD248Q9HCU0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.94■□□□□ 0.62
CD248Q9HCU0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CD248Q9HCU0 AP002383.4-201ENST00000442518 975 ntBASIC18.94■□□□□ 0.62
CD248Q9HCU0 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.94■□□□□ 0.62
CD248Q9HCU0 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
CD248Q9HCU0 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.94■□□□□ 0.62
CD248Q9HCU0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD248Q9HCU0 AC092119.3-201ENST00000612618 583 ntBASIC18.94■□□□□ 0.62
CD248Q9HCU0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD248Q9HCU0 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CD248Q9HCU0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD248Q9HCU0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CD248Q9HCU0 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
CD248Q9HCU0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD248Q9HCU0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CD248Q9HCU0 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.94■□□□□ 0.62
CD248Q9HCU0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CD248Q9HCU0 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CD248Q9HCU0 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CD248Q9HCU0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD248Q9HCU0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD248Q9HCU0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD248Q9HCU0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD248Q9HCU0 AL031598.1-201ENST00000561511 1773 ntBASIC18.93■□□□□ 0.62
CD248Q9HCU0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.93■□□□□ 0.62
CD248Q9HCU0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD248Q9HCU0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CD248Q9HCU0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD248Q9HCU0 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD248Q9HCU0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.93■□□□□ 0.62
CD248Q9HCU0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.93■□□□□ 0.62
CD248Q9HCU0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.93■□□□□ 0.62
CD248Q9HCU0 MIR3917-201ENST00000580971 93 ntBASIC18.93■□□□□ 0.62
CD248Q9HCU0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.93■□□□□ 0.62
CD248Q9HCU0 AL157888.1-201ENST00000631930 593 ntBASIC18.93■□□□□ 0.62
CD248Q9HCU0 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD248Q9HCU0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD248Q9HCU0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD248Q9HCU0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD248Q9HCU0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CD248Q9HCU0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CD248Q9HCU0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD248Q9HCU0 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.93■□□□□ 0.62
CD248Q9HCU0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD248Q9HCU0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CD248Q9HCU0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.92■□□□□ 0.62
CD248Q9HCU0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CD248Q9HCU0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
CD248Q9HCU0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CD248Q9HCU0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CD248Q9HCU0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.92■□□□□ 0.62
CD248Q9HCU0 AL109659.2-201ENST00000606809 1674 ntBASIC18.92■□□□□ 0.62
CD248Q9HCU0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CD248Q9HCU0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CD248Q9HCU0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CD248Q9HCU0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.92■□□□□ 0.62
CD248Q9HCU0 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.92■□□□□ 0.62
CD248Q9HCU0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CD248Q9HCU0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.92■□□□□ 0.62
CD248Q9HCU0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.92■□□□□ 0.62
CD248Q9HCU0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CD248Q9HCU0 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CD248Q9HCU0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.92■□□□□ 0.62
CD248Q9HCU0 AL162741.1-201ENST00000565563 1558 ntBASIC18.92■□□□□ 0.62
CD248Q9HCU0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CD248Q9HCU0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CD248Q9HCU0 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms