Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 IGHV3-47-201ENST00000425060 335 ntBASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 KRT18P65-201ENST00000439811 1286 ntBASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 VENTXP7-201ENST00000475503 772 ntBASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 AC138894.3-201ENST00000603787 634 ntBASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 NSUN5P1-202ENST00000421140 1535 ntBASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 NSUN5P2-203ENST00000457352 1529 ntBASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 REXO1L9P-201ENST00000604264 2108 ntBASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VAT1LQ9HCJ6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 AC093010.1-201ENST00000473625 1624 ntBASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 AL450487.1-201ENST00000426799 995 ntBASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 NUS1P1-201ENST00000446295 882 ntBASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 MINOS1P3-201ENST00000457048 203 ntBASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VAT1LQ9HCJ6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
VAT1LQ9HCJ6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
VAT1LQ9HCJ6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VAT1LQ9HCJ6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.85■□□□□ 0.93
VAT1LQ9HCJ6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VAT1LQ9HCJ6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VAT1LQ9HCJ6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.85■□□□□ 0.93
VAT1LQ9HCJ6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.85■□□□□ 0.93
VAT1LQ9HCJ6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.85■□□□□ 0.93
VAT1LQ9HCJ6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.85■□□□□ 0.93
VAT1LQ9HCJ6 AL121894.2-201ENST00000602977 491 ntBASIC20.85■□□□□ 0.93
VAT1LQ9HCJ6 AL732292.2-201ENST00000609649 430 ntBASIC20.85■□□□□ 0.93
VAT1LQ9HCJ6 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VAT1LQ9HCJ6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VAT1LQ9HCJ6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.85■□□□□ 0.93
VAT1LQ9HCJ6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
VAT1LQ9HCJ6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VAT1LQ9HCJ6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.85■□□□□ 0.93
VAT1LQ9HCJ6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VAT1LQ9HCJ6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VAT1LQ9HCJ6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
VAT1LQ9HCJ6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
VAT1LQ9HCJ6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VAT1LQ9HCJ6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VAT1LQ9HCJ6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VAT1LQ9HCJ6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
VAT1LQ9HCJ6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
VAT1LQ9HCJ6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
VAT1LQ9HCJ6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.84■□□□□ 0.93
VAT1LQ9HCJ6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.84■□□□□ 0.93
VAT1LQ9HCJ6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
VAT1LQ9HCJ6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
VAT1LQ9HCJ6 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VAT1LQ9HCJ6 UNC93B7-201ENST00000509439 705 ntBASIC20.84■□□□□ 0.93
VAT1LQ9HCJ6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.84■□□□□ 0.93
VAT1LQ9HCJ6 AC112698.1-201ENST00000510299 916 ntBASIC20.84■□□□□ 0.93
VAT1LQ9HCJ6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.84■□□□□ 0.93
VAT1LQ9HCJ6 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms