Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 AC107918.4-202ENST00000641623 219 ntBASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPAP3Q9H6T3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RPAP3Q9H6T3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPAP3Q9H6T3 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.66■□□□□ 0.9
RPAP3Q9H6T3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.66■□□□□ 0.9
RPAP3Q9H6T3 RNA5SP415-201ENST00000517246 115 ntBASIC20.66■□□□□ 0.9
RPAP3Q9H6T3 AC034105.1-201ENST00000563488 319 ntBASIC20.66■□□□□ 0.9
RPAP3Q9H6T3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.66■□□□□ 0.9
RPAP3Q9H6T3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.66■□□□□ 0.9
RPAP3Q9H6T3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPAP3Q9H6T3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPAP3Q9H6T3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPAP3Q9H6T3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPAP3Q9H6T3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.66■□□□□ 0.9
RPAP3Q9H6T3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPAP3Q9H6T3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPAP3Q9H6T3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPAP3Q9H6T3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 AC079776.2-201ENST00000641154 1609 ntBASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 AP002414.3-201ENST00000589352 1468 ntBASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 BX842568.4-201ENST00000421222 227 ntBASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 AC105339.3-201ENST00000560043 636 ntBASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 AC140113.2-201ENST00000604370 208 ntBASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPAP3Q9H6T3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RPAP3Q9H6T3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.64■□□□□ 0.9
RPAP3Q9H6T3 PMPCAP1-201ENST00000508114 1576 ntBASIC20.64■□□□□ 0.9
RPAP3Q9H6T3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.64■□□□□ 0.9
RPAP3Q9H6T3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.64■□□□□ 0.9
RPAP3Q9H6T3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPAP3Q9H6T3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.64■□□□□ 0.89
RPAP3Q9H6T3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPAP3Q9H6T3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPAP3Q9H6T3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPAP3Q9H6T3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RPAP3Q9H6T3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.64■□□□□ 0.89
RPAP3Q9H6T3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RPAP3Q9H6T3 AC122714.2-201ENST00000502787 707 ntBASIC20.64■□□□□ 0.89
RPAP3Q9H6T3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.64■□□□□ 0.89
RPAP3Q9H6T3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.64■□□□□ 0.89
RPAP3Q9H6T3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RPAP3Q9H6T3 Z83851.2-201ENST00000609564 659 ntBASIC20.64■□□□□ 0.89
RPAP3Q9H6T3 AC027601.4-201ENST00000611259 610 ntBASIC20.64■□□□□ 0.89
RPAP3Q9H6T3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RPAP3Q9H6T3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPAP3Q9H6T3 AC073592.3-201ENST00000625118 1834 ntBASIC20.64■□□□□ 0.89
RPAP3Q9H6T3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPAP3Q9H6T3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RPAP3Q9H6T3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RPAP3Q9H6T3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.63■□□□□ 0.89
RPAP3Q9H6T3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.63■□□□□ 0.89
RPAP3Q9H6T3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPAP3Q9H6T3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPAP3Q9H6T3 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.63■□□□□ 0.89
RPAP3Q9H6T3 MIR1233-2-201ENST00000408138 82 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms