Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIPK3Q9H422 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIPK3Q9H422 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIPK3Q9H422 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
HIPK3Q9H422 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIPK3Q9H422 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK3Q9H422 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.63■□□□□ 0.73
HIPK3Q9H422 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK3Q9H422 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
HIPK3Q9H422 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK3Q9H422 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK3Q9H422 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK3Q9H422 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.63■□□□□ 0.73
HIPK3Q9H422 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.63■□□□□ 0.73
HIPK3Q9H422 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
HIPK3Q9H422 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HIPK3Q9H422 PMPCAP1-201ENST00000508114 1576 ntBASIC19.63■□□□□ 0.73
HIPK3Q9H422 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK3Q9H422 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK3Q9H422 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK3Q9H422 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
HIPK3Q9H422 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK3Q9H422 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK3Q9H422 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
HIPK3Q9H422 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.63■□□□□ 0.73
HIPK3Q9H422 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
HIPK3Q9H422 AC136632.2-201ENST00000512891 861 ntBASIC19.63■□□□□ 0.73
HIPK3Q9H422 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK3Q9H422 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.63■□□□□ 0.73
HIPK3Q9H422 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK3Q9H422 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
HIPK3Q9H422 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.63■□□□□ 0.73
HIPK3Q9H422 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.63■□□□□ 0.73
HIPK3Q9H422 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.63■□□□□ 0.73
HIPK3Q9H422 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK3Q9H422 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK3Q9H422 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK3Q9H422 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK3Q9H422 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK3Q9H422 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
HIPK3Q9H422 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.63■□□□□ 0.73
HIPK3Q9H422 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIPK3Q9H422 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIPK3Q9H422 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.62■□□□□ 0.73
HIPK3Q9H422 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIPK3Q9H422 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HIPK3Q9H422 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HIPK3Q9H422 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HIPK3Q9H422 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
HIPK3Q9H422 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.62■□□□□ 0.73
HIPK3Q9H422 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIPK3Q9H422 AC073621.1-201ENST00000392730 636 ntBASIC19.62■□□□□ 0.73
HIPK3Q9H422 MCCD1P2-201ENST00000423228 335 ntBASIC19.62■□□□□ 0.73
HIPK3Q9H422 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.62■□□□□ 0.73
HIPK3Q9H422 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.62■□□□□ 0.73
HIPK3Q9H422 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HIPK3Q9H422 AC005829.1-201ENST00000570002 483 ntBASIC19.62■□□□□ 0.73
HIPK3Q9H422 AC004817.3-201ENST00000602957 2129 ntBASIC19.62■□□□□ 0.73
HIPK3Q9H422 AC073592.4-201ENST00000623827 446 ntBASIC19.62■□□□□ 0.73
HIPK3Q9H422 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HIPK3Q9H422 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.62■□□□□ 0.73
HIPK3Q9H422 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.62■□□□□ 0.73
HIPK3Q9H422 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.62■□□□□ 0.73
HIPK3Q9H422 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
HIPK3Q9H422 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIPK3Q9H422 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIPK3Q9H422 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.61■□□□□ 0.73
HIPK3Q9H422 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HIPK3Q9H422 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HIPK3Q9H422 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.61■□□□□ 0.73
HIPK3Q9H422 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HIPK3Q9H422 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HIPK3Q9H422 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.61■□□□□ 0.73
HIPK3Q9H422 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.61■□□□□ 0.73
HIPK3Q9H422 KRT18P2-201ENST00000447938 1258 ntBASIC19.61■□□□□ 0.73
HIPK3Q9H422 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HIPK3Q9H422 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.61■□□□□ 0.73
HIPK3Q9H422 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.61■□□□□ 0.73
HIPK3Q9H422 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.61■□□□□ 0.73
HIPK3Q9H422 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.61■□□□□ 0.73
HIPK3Q9H422 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.61■□□□□ 0.73
HIPK3Q9H422 SNHG9-202ENST00000564014 471 ntBASIC19.61■□□□□ 0.73
HIPK3Q9H422 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.61■□□□□ 0.73
HIPK3Q9H422 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
HIPK3Q9H422 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.61■□□□□ 0.73
HIPK3Q9H422 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HIPK3Q9H422 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.61■□□□□ 0.73
HIPK3Q9H422 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HIPK3Q9H422 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
HIPK3Q9H422 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HIPK3Q9H422 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HIPK3Q9H422 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.61■□□□□ 0.73
HIPK3Q9H422 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
HIPK3Q9H422 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
HIPK3Q9H422 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HIPK3Q9H422 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HIPK3Q9H422 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.61■□□□□ 0.73
HIPK3Q9H422 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HIPK3Q9H422 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.6■□□□□ 0.73
HIPK3Q9H422 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms