Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 KRT18P23-201ENST00000435622 1283 ntBASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 RARRES2P10-201ENST00000564312 460 ntBASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 SLC25A1P4-201ENST00000567977 778 ntBASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 AC106886.4-201ENST00000623557 2502 ntBASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 TPR-209ENST00000613151 2478 ntTSL 5 BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
KRTAP3-1Q9BYR8 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC9.15□□□□□ -0.95
KRTAP3-1Q9BYR8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC9.15□□□□□ -0.95
KRTAP3-1Q9BYR8 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
KRTAP3-1Q9BYR8 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
KRTAP3-1Q9BYR8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
KRTAP3-1Q9BYR8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC9.15□□□□□ -0.95
KRTAP3-1Q9BYR8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
KRTAP3-1Q9BYR8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
KRTAP3-1Q9BYR8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 C20orf85-201ENST00000371168 803 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 MIR935-201ENST00000401179 91 ntBASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 FAM197Y1-201ENST00000421178 764 ntBASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 UPF3AP2-201ENST00000457924 1132 ntBASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 CA15P1-201ENST00000481698 905 ntBASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 AC116562.2-201ENST00000507042 360 ntBASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 AC090192.1-201ENST00000517740 490 ntBASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 AC079791.1-201ENST00000605356 973 ntBASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 AC006058.3-201ENST00000606217 1069 ntBASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 KRT8P7-201ENST00000533003 1432 ntBASIC9.14□□□□□ -0.95
KRTAP3-1Q9BYR8 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms