Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
VGLL1Q99990 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
VGLL1Q99990 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
VGLL1Q99990 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VGLL1Q99990 AL645608.8-201ENST00000606034 2086 ntBASIC13.7□□□□□ -0.22
VGLL1Q99990 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VGLL1Q99990 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
VGLL1Q99990 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VGLL1Q99990 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
VGLL1Q99990 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
VGLL1Q99990 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
VGLL1Q99990 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.7□□□□□ -0.22
VGLL1Q99990 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
VGLL1Q99990 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
VGLL1Q99990 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
VGLL1Q99990 MIR149-201ENST00000384879 89 ntBASIC13.7□□□□□ -0.22
VGLL1Q99990 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC13.7□□□□□ -0.22
VGLL1Q99990 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VGLL1Q99990 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC13.7□□□□□ -0.22
VGLL1Q99990 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
VGLL1Q99990 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC13.7□□□□□ -0.22
VGLL1Q99990 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.7□□□□□ -0.22
VGLL1Q99990 AC116562.2-201ENST00000507042 360 ntBASIC13.7□□□□□ -0.22
VGLL1Q99990 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC13.7□□□□□ -0.22
VGLL1Q99990 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
VGLL1Q99990 MIR4674-201ENST00000582457 87 ntBASIC13.7□□□□□ -0.22
VGLL1Q99990 NAT14-202ENST00000587400 416 ntTSL 5 BASIC13.7□□□□□ -0.22
VGLL1Q99990 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC13.7□□□□□ -0.22
VGLL1Q99990 CYGB-204ENST00000589342 815 ntTSL 3 BASIC13.7□□□□□ -0.22
VGLL1Q99990 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC13.7□□□□□ -0.22
VGLL1Q99990 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.7□□□□□ -0.22
VGLL1Q99990 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
VGLL1Q99990 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
VGLL1Q99990 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
VGLL1Q99990 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VGLL1Q99990 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
VGLL1Q99990 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
VGLL1Q99990 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.7□□□□□ -0.22
VGLL1Q99990 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC13.7□□□□□ -0.22
VGLL1Q99990 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
VGLL1Q99990 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
VGLL1Q99990 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC13.7□□□□□ -0.22
VGLL1Q99990 AC006116.8-202ENST00000587620 1550 ntBASIC13.7□□□□□ -0.22
VGLL1Q99990 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VGLL1Q99990 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC13.7□□□□□ -0.22
VGLL1Q99990 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
VGLL1Q99990 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.7□□□□□ -0.22
VGLL1Q99990 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VGLL1Q99990 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.7□□□□□ -0.22
VGLL1Q99990 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VGLL1Q99990 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VGLL1Q99990 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC13.69□□□□□ -0.22
VGLL1Q99990 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
VGLL1Q99990 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VGLL1Q99990 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VGLL1Q99990 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC13.69□□□□□ -0.22
VGLL1Q99990 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
VGLL1Q99990 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VGLL1Q99990 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
VGLL1Q99990 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VGLL1Q99990 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC13.69□□□□□ -0.22
VGLL1Q99990 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC13.69□□□□□ -0.22
VGLL1Q99990 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VGLL1Q99990 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VGLL1Q99990 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
VGLL1Q99990 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VGLL1Q99990 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
VGLL1Q99990 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VGLL1Q99990 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
VGLL1Q99990 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VGLL1Q99990 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC13.69□□□□□ -0.22
VGLL1Q99990 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
VGLL1Q99990 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
VGLL1Q99990 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VGLL1Q99990 CA15P1-201ENST00000481698 905 ntBASIC13.69□□□□□ -0.22
VGLL1Q99990 NUDT16P1-203ENST00000513809 620 ntBASIC13.69□□□□□ -0.22
VGLL1Q99990 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC13.69□□□□□ -0.22
VGLL1Q99990 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC13.69□□□□□ -0.22
VGLL1Q99990 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.69□□□□□ -0.22
VGLL1Q99990 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC13.69□□□□□ -0.22
VGLL1Q99990 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC13.69□□□□□ -0.22
VGLL1Q99990 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC13.69□□□□□ -0.22
VGLL1Q99990 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC13.69□□□□□ -0.22
VGLL1Q99990 AL135905.2-201ENST00000584934 1404 ntBASIC13.69□□□□□ -0.22
VGLL1Q99990 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
VGLL1Q99990 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VGLL1Q99990 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VGLL1Q99990 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC13.69□□□□□ -0.22
VGLL1Q99990 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VGLL1Q99990 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VGLL1Q99990 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
VGLL1Q99990 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
VGLL1Q99990 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VGLL1Q99990 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VGLL1Q99990 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VGLL1Q99990 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
VGLL1Q99990 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VGLL1Q99990 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
VGLL1Q99990 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
VGLL1Q99990 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms