Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NPAS2Q99743 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS2Q99743 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS2Q99743 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS2Q99743 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS2Q99743 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.67■□□□□ 0.42
NPAS2Q99743 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS2Q99743 AC141586.5-201ENST00000624546 2050 ntBASIC17.67■□□□□ 0.42
NPAS2Q99743 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS2Q99743 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.66■□□□□ 0.42
NPAS2Q99743 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS2Q99743 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
NPAS2Q99743 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.66■□□□□ 0.42
NPAS2Q99743 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS2Q99743 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.66■□□□□ 0.42
NPAS2Q99743 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS2Q99743 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
NPAS2Q99743 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS2Q99743 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS2Q99743 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS2Q99743 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.66■□□□□ 0.42
NPAS2Q99743 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
NPAS2Q99743 HMGA1P5-201ENST00000412453 271 ntBASIC17.66■□□□□ 0.42
NPAS2Q99743 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS2Q99743 AL049597.2-201ENST00000565575 961 ntBASIC17.66■□□□□ 0.42
NPAS2Q99743 AL353719.1-201ENST00000566847 864 ntBASIC17.66■□□□□ 0.42
NPAS2Q99743 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NPAS2Q99743 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.66■□□□□ 0.42
NPAS2Q99743 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
NPAS2Q99743 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS2Q99743 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.66■□□□□ 0.42
NPAS2Q99743 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS2Q99743 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS2Q99743 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS2Q99743 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS2Q99743 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.66■□□□□ 0.42
NPAS2Q99743 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
NPAS2Q99743 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS2Q99743 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS2Q99743 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS2Q99743 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
NPAS2Q99743 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS2Q99743 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS2Q99743 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.66■□□□□ 0.42
NPAS2Q99743 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS2Q99743 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.66■□□□□ 0.42
NPAS2Q99743 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NPAS2Q99743 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.66■□□□□ 0.42
NPAS2Q99743 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS2Q99743 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS2Q99743 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS2Q99743 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
NPAS2Q99743 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS2Q99743 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.65■□□□□ 0.42
NPAS2Q99743 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.65■□□□□ 0.42
NPAS2Q99743 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.65■□□□□ 0.42
NPAS2Q99743 CA15P1-201ENST00000481698 905 ntBASIC17.65■□□□□ 0.42
NPAS2Q99743 KRT18P35-201ENST00000510488 1269 ntBASIC17.65■□□□□ 0.42
NPAS2Q99743 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.65■□□□□ 0.42
NPAS2Q99743 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.65■□□□□ 0.42
NPAS2Q99743 AL138966.2-201ENST00000621997 464 ntBASIC17.65■□□□□ 0.42
NPAS2Q99743 AC010653.2-201ENST00000623505 997 ntBASIC17.65■□□□□ 0.42
NPAS2Q99743 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS2Q99743 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
NPAS2Q99743 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS2Q99743 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS2Q99743 AC099343.3-201ENST00000605834 2503 ntBASIC17.65■□□□□ 0.42
NPAS2Q99743 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS2Q99743 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS2Q99743 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS2Q99743 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.65■□□□□ 0.42
NPAS2Q99743 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS2Q99743 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
NPAS2Q99743 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NPAS2Q99743 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS2Q99743 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NPAS2Q99743 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
NPAS2Q99743 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS2Q99743 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.64■□□□□ 0.41
NPAS2Q99743 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS2Q99743 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.64■□□□□ 0.41
NPAS2Q99743 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS2Q99743 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
NPAS2Q99743 PHGDH-209ENST00000641074 1780 ntBASIC17.64■□□□□ 0.41
NPAS2Q99743 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS2Q99743 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS2Q99743 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS2Q99743 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS2Q99743 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.64■□□□□ 0.41
NPAS2Q99743 LIN28AP1-201ENST00000429574 405 ntBASIC17.64■□□□□ 0.41
NPAS2Q99743 ATP5G1P1-201ENST00000448724 379 ntBASIC17.64■□□□□ 0.41
NPAS2Q99743 TSPY17P-201ENST00000450329 467 ntBASIC17.64■□□□□ 0.41
NPAS2Q99743 DUX4L26-201ENST00000489078 1255 ntBASIC17.64■□□□□ 0.41
NPAS2Q99743 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS2Q99743 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS2Q99743 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NPAS2Q99743 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.64■□□□□ 0.41
NPAS2Q99743 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS2Q99743 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
NPAS2Q99743 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms