Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
COL12A1Q99715 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.65■□□□□ 0.1
COL12A1Q99715 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.65■□□□□ 0.1
COL12A1Q99715 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.65■□□□□ 0.1
COL12A1Q99715 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.65■□□□□ 0.1
COL12A1Q99715 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.65■□□□□ 0.1
COL12A1Q99715 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
COL12A1Q99715 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.65■□□□□ 0.1
COL12A1Q99715 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL12A1Q99715 SERBP1P5-201ENST00000510079 1181 ntBASIC15.65■□□□□ 0.1
COL12A1Q99715 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.65■□□□□ 0.1
COL12A1Q99715 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COL12A1Q99715 AC116407.2-201ENST00000613639 860 ntBASIC15.65■□□□□ 0.1
COL12A1Q99715 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.65■□□□□ 0.1
COL12A1Q99715 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15.65■□□□□ 0.1
COL12A1Q99715 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COL12A1Q99715 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
COL12A1Q99715 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
COL12A1Q99715 SLC25A6P5-201ENST00000435663 894 ntBASIC15.64■□□□□ 0.09
COL12A1Q99715 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.64■□□□□ 0.09
COL12A1Q99715 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.64■□□□□ 0.09
COL12A1Q99715 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL12A1Q99715 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.64■□□□□ 0.09
COL12A1Q99715 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
COL12A1Q99715 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL12A1Q99715 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL12A1Q99715 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
COL12A1Q99715 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL12A1Q99715 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.64■□□□□ 0.09
COL12A1Q99715 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL12A1Q99715 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL12A1Q99715 FO538757.1-201ENST00000623083 1397 ntBASIC15.64■□□□□ 0.09
COL12A1Q99715 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.64■□□□□ 0.09
COL12A1Q99715 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL12A1Q99715 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL12A1Q99715 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL12A1Q99715 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL12A1Q99715 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
COL12A1Q99715 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
COL12A1Q99715 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.64■□□□□ 0.09
COL12A1Q99715 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL12A1Q99715 AL033527.4-201ENST00000641026 673 ntBASIC15.64■□□□□ 0.09
COL12A1Q99715 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL12A1Q99715 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL12A1Q99715 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
COL12A1Q99715 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL12A1Q99715 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL12A1Q99715 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL12A1Q99715 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.63■□□□□ 0.09
COL12A1Q99715 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.63■□□□□ 0.09
COL12A1Q99715 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL12A1Q99715 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.63■□□□□ 0.09
COL12A1Q99715 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.63■□□□□ 0.09
COL12A1Q99715 LINC02560-201ENST00000596379 459 ntBASIC15.63■□□□□ 0.09
COL12A1Q99715 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.63■□□□□ 0.09
COL12A1Q99715 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.63■□□□□ 0.09
COL12A1Q99715 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.63■□□□□ 0.09
COL12A1Q99715 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL12A1Q99715 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL12A1Q99715 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL12A1Q99715 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
COL12A1Q99715 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL12A1Q99715 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.63■□□□□ 0.09
COL12A1Q99715 BCAR1-209ENST00000546196 1340 ntBASIC15.63■□□□□ 0.09
COL12A1Q99715 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL12A1Q99715 RHOQP3-201ENST00000437982 621 ntBASIC15.63■□□□□ 0.09
COL12A1Q99715 PARP8-218ENST00000513738 596 ntTSL 4 BASIC15.63■□□□□ 0.09
COL12A1Q99715 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.63■□□□□ 0.09
COL12A1Q99715 MIR4751-201ENST00000578027 74 ntBASIC15.63■□□□□ 0.09
COL12A1Q99715 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL12A1Q99715 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.63■□□□□ 0.09
COL12A1Q99715 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.63■□□□□ 0.09
COL12A1Q99715 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL12A1Q99715 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.63■□□□□ 0.09
COL12A1Q99715 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL12A1Q99715 AL024508.2-201ENST00000607749 1894 ntBASIC15.63■□□□□ 0.09
COL12A1Q99715 AL121761.2-201ENST00000598007 1648 ntBASIC15.63■□□□□ 0.09
COL12A1Q99715 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL12A1Q99715 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL12A1Q99715 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL12A1Q99715 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL12A1Q99715 MRPS18AP1-201ENST00000414458 589 ntBASIC15.62■□□□□ 0.09
COL12A1Q99715 U91328.1-201ENST00000437528 223 ntBASIC15.62■□□□□ 0.09
COL12A1Q99715 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.62■□□□□ 0.09
COL12A1Q99715 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.62■□□□□ 0.09
COL12A1Q99715 AC010336.2-201ENST00000564226 506 ntBASIC15.62■□□□□ 0.09
COL12A1Q99715 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
COL12A1Q99715 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
COL12A1Q99715 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.62■□□□□ 0.09
COL12A1Q99715 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL12A1Q99715 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL12A1Q99715 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
COL12A1Q99715 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL12A1Q99715 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL12A1Q99715 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.62■□□□□ 0.09
COL12A1Q99715 SDHAP2-201ENST00000455183 2001 ntBASIC15.62■□□□□ 0.09
COL12A1Q99715 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
COL12A1Q99715 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL12A1Q99715 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL12A1Q99715 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms