Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AC006504.4-201ENST00000592118 1568 ntBASIC18.67■□□□□ 0.58
CDCA3Q99618 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDCA3Q99618 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
CDCA3Q99618 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA3Q99618 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA3Q99618 PCDHAC2-203ENST00000615316 3011 ntBASIC18.66■□□□□ 0.58
CDCA3Q99618 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CDCA3Q99618 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.66■□□□□ 0.58
CDCA3Q99618 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.66■□□□□ 0.58
CDCA3Q99618 AL353593.2-201ENST00000602529 1483 ntBASIC18.66■□□□□ 0.58
CDCA3Q99618 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.66■□□□□ 0.58
CDCA3Q99618 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA3Q99618 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CDCA3Q99618 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA3Q99618 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA3Q99618 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.66■□□□□ 0.58
CDCA3Q99618 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.66■□□□□ 0.58
CDCA3Q99618 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.66■□□□□ 0.58
CDCA3Q99618 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CDCA3Q99618 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA3Q99618 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.66■□□□□ 0.58
CDCA3Q99618 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.66■□□□□ 0.58
CDCA3Q99618 AL513190.1-201ENST00000621254 727 ntBASIC18.66■□□□□ 0.58
CDCA3Q99618 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.66■□□□□ 0.58
CDCA3Q99618 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.66■□□□□ 0.58
CDCA3Q99618 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA3Q99618 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA3Q99618 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA3Q99618 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA3Q99618 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA3Q99618 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA3Q99618 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA3Q99618 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.66■□□□□ 0.58
CDCA3Q99618 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA3Q99618 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.66■□□□□ 0.58
CDCA3Q99618 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.65■□□□□ 0.58
CDCA3Q99618 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA3Q99618 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.65■□□□□ 0.58
CDCA3Q99618 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA3Q99618 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA3Q99618 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.65■□□□□ 0.58
CDCA3Q99618 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.65■□□□□ 0.58
CDCA3Q99618 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA3Q99618 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA3Q99618 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA3Q99618 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.65■□□□□ 0.58
CDCA3Q99618 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CDCA3Q99618 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.65■□□□□ 0.58
CDCA3Q99618 RPS15P9-201ENST00000494093 319 ntBASIC18.65■□□□□ 0.58
CDCA3Q99618 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.65■□□□□ 0.58
CDCA3Q99618 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.65■□□□□ 0.58
CDCA3Q99618 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.65■□□□□ 0.58
CDCA3Q99618 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.65■□□□□ 0.58
CDCA3Q99618 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA3Q99618 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA3Q99618 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA3Q99618 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.65■□□□□ 0.58
CDCA3Q99618 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA3Q99618 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA3Q99618 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDCA3Q99618 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.64■□□□□ 0.58
CDCA3Q99618 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDCA3Q99618 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.64■□□□□ 0.57
CDCA3Q99618 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDCA3Q99618 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDCA3Q99618 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDCA3Q99618 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.64■□□□□ 0.57
CDCA3Q99618 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.64■□□□□ 0.57
CDCA3Q99618 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.64■□□□□ 0.57
CDCA3Q99618 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CDCA3Q99618 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.64■□□□□ 0.57
CDCA3Q99618 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDCA3Q99618 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
CDCA3Q99618 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.64■□□□□ 0.57
CDCA3Q99618 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDCA3Q99618 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.64■□□□□ 0.57
CDCA3Q99618 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDCA3Q99618 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CDCA3Q99618 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDCA3Q99618 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDCA3Q99618 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDCA3Q99618 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.64■□□□□ 0.57
CDCA3Q99618 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CDCA3Q99618 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.63■□□□□ 0.57
CDCA3Q99618 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDCA3Q99618 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDCA3Q99618 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDCA3Q99618 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDCA3Q99618 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.63■□□□□ 0.57
CDCA3Q99618 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CDCA3Q99618 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDCA3Q99618 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDCA3Q99618 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDCA3Q99618 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.63■□□□□ 0.57
CDCA3Q99618 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.63■□□□□ 0.57
CDCA3Q99618 CEND1P1-201ENST00000451006 455 ntBASIC18.63■□□□□ 0.57
CDCA3Q99618 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.63■□□□□ 0.57
CDCA3Q99618 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.63■□□□□ 0.57
CDCA3Q99618 AC018845.2-201ENST00000568326 409 ntBASIC18.63■□□□□ 0.57
CDCA3Q99618 AC092364.2-202ENST00000597012 1073 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms