Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 AL162727.3-201ENST00000635661 2787 ntBASIC13.65□□□□□ -0.22
AP1S3Q96PC3 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 TSPY23P-201ENST00000440136 739 ntBASIC13.65□□□□□ -0.22
AP1S3Q96PC3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 OR2A1-AS1-207ENST00000486094 819 ntBASIC13.65□□□□□ -0.22
AP1S3Q96PC3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 AC080038.1-201ENST00000611274 1154 ntBASIC13.65□□□□□ -0.22
AP1S3Q96PC3 ANKRD20A6P-201ENST00000618763 204 ntBASIC13.65□□□□□ -0.22
AP1S3Q96PC3 AL050303.2-201ENST00000619798 666 ntBASIC13.65□□□□□ -0.22
AP1S3Q96PC3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 AC073111.5-205ENST00000641717 521 ntBASIC13.65□□□□□ -0.22
AP1S3Q96PC3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 KATNBL1P6-202ENST00000562413 1466 ntBASIC13.65□□□□□ -0.22
AP1S3Q96PC3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S3Q96PC3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
AP1S3Q96PC3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.65□□□□□ -0.23
AP1S3Q96PC3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 AL162430.1-201ENST00000480705 870 ntBASIC13.64□□□□□ -0.23
AP1S3Q96PC3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 AL160286.2-201ENST00000567150 934 ntBASIC13.64□□□□□ -0.23
AP1S3Q96PC3 AC060766.5-201ENST00000590539 871 ntBASIC13.64□□□□□ -0.23
AP1S3Q96PC3 MIR5787-201ENST00000611784 55 ntBASIC13.64□□□□□ -0.23
AP1S3Q96PC3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 AL596257.1-201ENST00000641463 2694 ntBASIC13.64□□□□□ -0.23
AP1S3Q96PC3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S3Q96PC3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms