Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RTP4Q96DX8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.39■□□□□ 0.53
RTP4Q96DX8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTP4Q96DX8 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTP4Q96DX8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTP4Q96DX8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTP4Q96DX8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTP4Q96DX8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.38■□□□□ 0.53
RTP4Q96DX8 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
RTP4Q96DX8 AL391807.1-203ENST00000604392 2365 ntBASIC18.38■□□□□ 0.53
RTP4Q96DX8 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTP4Q96DX8 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTP4Q96DX8 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.38■□□□□ 0.53
RTP4Q96DX8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTP4Q96DX8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RTP4Q96DX8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
RTP4Q96DX8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
RTP4Q96DX8 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTP4Q96DX8 AC117947.1-201ENST00000427448 529 ntBASIC18.38■□□□□ 0.53
RTP4Q96DX8 HLA-F-220ENST00000434407 884 ntBASIC18.38■□□□□ 0.53
RTP4Q96DX8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTP4Q96DX8 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTP4Q96DX8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.38■□□□□ 0.53
RTP4Q96DX8 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
RTP4Q96DX8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.38■□□□□ 0.53
RTP4Q96DX8 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RTP4Q96DX8 AL031432.5-201ENST00000641059 760 ntBASIC18.38■□□□□ 0.53
RTP4Q96DX8 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTP4Q96DX8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTP4Q96DX8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.38■□□□□ 0.53
RTP4Q96DX8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTP4Q96DX8 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.38■□□□□ 0.53
RTP4Q96DX8 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTP4Q96DX8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTP4Q96DX8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.37■□□□□ 0.53
RTP4Q96DX8 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.37■□□□□ 0.53
RTP4Q96DX8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTP4Q96DX8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTP4Q96DX8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTP4Q96DX8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTP4Q96DX8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTP4Q96DX8 AC063952.2-201ENST00000498792 1227 ntBASIC18.37■□□□□ 0.53
RTP4Q96DX8 AC022616.7-201ENST00000525383 220 ntBASIC18.37■□□□□ 0.53
RTP4Q96DX8 AL441883.1-201ENST00000566170 1045 ntBASIC18.37■□□□□ 0.53
RTP4Q96DX8 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTP4Q96DX8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTP4Q96DX8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTP4Q96DX8 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTP4Q96DX8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.37■□□□□ 0.53
RTP4Q96DX8 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTP4Q96DX8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.37■□□□□ 0.53
RTP4Q96DX8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RTP4Q96DX8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTP4Q96DX8 SIRPAP1-201ENST00000448467 1770 ntBASIC18.37■□□□□ 0.53
RTP4Q96DX8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.37■□□□□ 0.53
RTP4Q96DX8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTP4Q96DX8 LINC00304-203ENST00000565008 1864 ntBASIC18.37■□□□□ 0.53
RTP4Q96DX8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RTP4Q96DX8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.37■□□□□ 0.53
RTP4Q96DX8 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.37■□□□□ 0.53
RTP4Q96DX8 AC139713.2-201ENST00000641328 2723 ntBASIC18.36■□□□□ 0.53
RTP4Q96DX8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTP4Q96DX8 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTP4Q96DX8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTP4Q96DX8 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTP4Q96DX8 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTP4Q96DX8 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.36■□□□□ 0.53
RTP4Q96DX8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.36■□□□□ 0.53
RTP4Q96DX8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.36■□□□□ 0.53
RTP4Q96DX8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.36■□□□□ 0.53
RTP4Q96DX8 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTP4Q96DX8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.36■□□□□ 0.53
RTP4Q96DX8 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.36■□□□□ 0.53
RTP4Q96DX8 COX11P1-201ENST00000489116 835 ntBASIC18.36■□□□□ 0.53
RTP4Q96DX8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTP4Q96DX8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTP4Q96DX8 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
RTP4Q96DX8 LINC01238-205ENST00000567549 1107 ntBASIC18.36■□□□□ 0.53
RTP4Q96DX8 AL136038.4-201ENST00000603606 1261 ntBASIC18.36■□□□□ 0.53
RTP4Q96DX8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.36■□□□□ 0.53
RTP4Q96DX8 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.36■□□□□ 0.53
RTP4Q96DX8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RTP4Q96DX8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.36■□□□□ 0.53
RTP4Q96DX8 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTP4Q96DX8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTP4Q96DX8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.35■□□□□ 0.53
RTP4Q96DX8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RTP4Q96DX8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RTP4Q96DX8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.35■□□□□ 0.53
RTP4Q96DX8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTP4Q96DX8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTP4Q96DX8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.35■□□□□ 0.53
RTP4Q96DX8 AL138688.1-201ENST00000624851 1594 ntBASIC18.35■□□□□ 0.53
RTP4Q96DX8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTP4Q96DX8 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTP4Q96DX8 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTP4Q96DX8 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTP4Q96DX8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.35■□□□□ 0.53
RTP4Q96DX8 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.35■□□□□ 0.53
RTP4Q96DX8 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms