Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.91■□□□□ 0.14
AP3S1Q92572 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP3S1Q92572 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP3S1Q92572 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
AP3S1Q92572 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
AP3S1Q92572 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
AP3S1Q92572 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S1Q92572 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
AP3S1Q92572 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S1Q92572 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S1Q92572 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
AP3S1Q92572 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
AP3S1Q92572 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
AP3S1Q92572 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S1Q92572 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S1Q92572 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
AP3S1Q92572 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S1Q92572 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.9■□□□□ 0.14
AP3S1Q92572 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S1Q92572 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S1Q92572 MDK-213ENST00000617138 635 ntTSL 2 BASIC15.9■□□□□ 0.14
AP3S1Q92572 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S1Q92572 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S1Q92572 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.9■□□□□ 0.14
AP3S1Q92572 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.9■□□□□ 0.14
AP3S1Q92572 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S1Q92572 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S1Q92572 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S1Q92572 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S1Q92572 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S1Q92572 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S1Q92572 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S1Q92572 AC093010.1-201ENST00000473625 1624 ntBASIC15.9■□□□□ 0.14
AP3S1Q92572 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S1Q92572 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.9■□□□□ 0.14
AP3S1Q92572 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.9■□□□□ 0.14
AP3S1Q92572 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.9■□□□□ 0.14
AP3S1Q92572 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
AP3S1Q92572 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S1Q92572 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S1Q92572 DOC2GP-204ENST00000639052 2548 ntBASIC15.9■□□□□ 0.14
AP3S1Q92572 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S1Q92572 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.14
AP3S1Q92572 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S1Q92572 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.89■□□□□ 0.13
AP3S1Q92572 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S1Q92572 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.89■□□□□ 0.13
AP3S1Q92572 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S1Q92572 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
AP3S1Q92572 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S1Q92572 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S1Q92572 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S1Q92572 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.89■□□□□ 0.13
AP3S1Q92572 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.89■□□□□ 0.13
AP3S1Q92572 KRT8P11-201ENST00000409686 1436 ntBASIC15.89■□□□□ 0.13
AP3S1Q92572 AC105020.1-201ENST00000435356 2205 ntBASIC15.89■□□□□ 0.13
AP3S1Q92572 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.89■□□□□ 0.13
AP3S1Q92572 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
AP3S1Q92572 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.89■□□□□ 0.13
AP3S1Q92572 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S1Q92572 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
AP3S1Q92572 C1QL1P1-201ENST00000568105 661 ntBASIC15.89■□□□□ 0.13
AP3S1Q92572 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.89■□□□□ 0.13
AP3S1Q92572 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC15.89■□□□□ 0.13
AP3S1Q92572 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
AP3S1Q92572 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC15.89■□□□□ 0.13
AP3S1Q92572 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S1Q92572 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S1Q92572 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S1Q92572 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S1Q92572 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.89■□□□□ 0.13
AP3S1Q92572 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
AP3S1Q92572 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.89■□□□□ 0.13
AP3S1Q92572 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S1Q92572 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S1Q92572 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
AP3S1Q92572 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.89■□□□□ 0.13
AP3S1Q92572 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S1Q92572 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S1Q92572 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S1Q92572 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S1Q92572 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S1Q92572 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S1Q92572 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S1Q92572 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S1Q92572 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S1Q92572 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.88■□□□□ 0.13
AP3S1Q92572 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S1Q92572 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S1Q92572 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
AP3S1Q92572 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.88■□□□□ 0.13
AP3S1Q92572 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S1Q92572 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S1Q92572 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S1Q92572 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
AP3S1Q92572 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
AP3S1Q92572 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC15.88■□□□□ 0.13
AP3S1Q92572 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.88■□□□□ 0.13
AP3S1Q92572 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
AP3S1Q92572 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms