Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC27.63■■■□□ 2.01
CCNB3Q8WWL7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC27.63■■■□□ 2.01
CCNB3Q8WWL7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC27.63■■■□□ 2.01
CCNB3Q8WWL7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
CCNB3Q8WWL7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
CCNB3Q8WWL7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC27.63■■■□□ 2.01
CCNB3Q8WWL7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC27.63■■■□□ 2.01
CCNB3Q8WWL7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC27.63■■■□□ 2.01
CCNB3Q8WWL7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC27.63■■■□□ 2.01
CCNB3Q8WWL7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
CCNB3Q8WWL7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CCNB3Q8WWL7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CCNB3Q8WWL7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CCNB3Q8WWL7 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CCNB3Q8WWL7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC27.62■■■□□ 2.01
CCNB3Q8WWL7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC27.62■■■□□ 2.01
CCNB3Q8WWL7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CCNB3Q8WWL7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
CCNB3Q8WWL7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC27.62■■■□□ 2.01
CCNB3Q8WWL7 AC012640.2-201ENST00000561606 901 ntBASIC27.62■■■□□ 2.01
CCNB3Q8WWL7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
CCNB3Q8WWL7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
CCNB3Q8WWL7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CCNB3Q8WWL7 EFTUD1P1-204ENST00000560401 1798 ntBASIC27.62■■■□□ 2.01
CCNB3Q8WWL7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CCNB3Q8WWL7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC27.62■■■□□ 2.01
CCNB3Q8WWL7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC27.62■■■□□ 2.01
CCNB3Q8WWL7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CCNB3Q8WWL7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
CCNB3Q8WWL7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CCNB3Q8WWL7 AC135776.1-201ENST00000319817 2481 ntBASIC27.62■■■□□ 2.01
CCNB3Q8WWL7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CCNB3Q8WWL7 RPS2P28-201ENST00000314255 741 ntBASIC27.61■■■□□ 2.01
CCNB3Q8WWL7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC27.61■■■□□ 2.01
CCNB3Q8WWL7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
CCNB3Q8WWL7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
CCNB3Q8WWL7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CCNB3Q8WWL7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC27.61■■■□□ 2.01
CCNB3Q8WWL7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC27.61■■■□□ 2.01
CCNB3Q8WWL7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC27.61■■■□□ 2.01
CCNB3Q8WWL7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC27.61■■■□□ 2.01
CCNB3Q8WWL7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC27.61■■■□□ 2.01
CCNB3Q8WWL7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
CCNB3Q8WWL7 POR-209ENST00000439269 1858 ntTSL 2 BASIC27.61■■■□□ 2.01
CCNB3Q8WWL7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 CD63-204ENST00000546939 779 ntTSL 3 BASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 ZNF259P1-201ENST00000407656 1365 ntBASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 PMS2P7-201ENST00000506558 1336 ntBASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 OR7E14P-202ENST00000530490 1290 ntBASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 TERC-201ENST00000602385 541 ntBASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC27.6■■■□□ 2.01
CCNB3Q8WWL7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC27.59■■■□□ 2.01
CCNB3Q8WWL7 AL020996.1-203ENST00000536896 2307 ntBASIC27.59■■■□□ 2.01
CCNB3Q8WWL7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
CCNB3Q8WWL7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
CCNB3Q8WWL7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
CCNB3Q8WWL7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC27.59■■■□□ 2.01
CCNB3Q8WWL7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC27.59■■■□□ 2.01
CCNB3Q8WWL7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC27.59■■■□□ 2.01
CCNB3Q8WWL7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
CCNB3Q8WWL7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
CCNB3Q8WWL7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
CCNB3Q8WWL7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC27.59■■■□□ 2.01
CCNB3Q8WWL7 AC092865.5-201ENST00000545435 363 ntBASIC27.59■■■□□ 2.01
CCNB3Q8WWL7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
CCNB3Q8WWL7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
CCNB3Q8WWL7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
CCNB3Q8WWL7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC27.58■■■□□ 2.01
CCNB3Q8WWL7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC27.58■■■□□ 2.01
CCNB3Q8WWL7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CCNB3Q8WWL7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CCNB3Q8WWL7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
CCNB3Q8WWL7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC27.58■■■□□ 2.01
CCNB3Q8WWL7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC27.58■■■□□ 2.01
CCNB3Q8WWL7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC27.58■■■□□ 2.01
CCNB3Q8WWL7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CCNB3Q8WWL7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms