Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 CROCCP2-202ENST00000412962 2773 ntBASIC18.08■□□□□ 0.48
SLC44A1Q8WWI5 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC44A1Q8WWI5 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC44A1Q8WWI5 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC44A1Q8WWI5 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC44A1Q8WWI5 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC44A1Q8WWI5 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.08■□□□□ 0.48
SLC44A1Q8WWI5 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.08■□□□□ 0.48
SLC44A1Q8WWI5 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC44A1Q8WWI5 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 CCR12P-201ENST00000446203 998 ntBASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC44A1Q8WWI5 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 AC093827.2-201ENST00000512654 315 ntBASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 AP003071.4-201ENST00000562276 1284 ntBASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.06■□□□□ 0.48
SLC44A1Q8WWI5 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 AC022898.2-201ENST00000616822 1312 ntBASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms