Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SSH3Q8TE77 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC22.23■■□□□ 1.15
SSH3Q8TE77 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SSH3Q8TE77 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
SSH3Q8TE77 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SSH3Q8TE77 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
SSH3Q8TE77 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
SSH3Q8TE77 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SSH3Q8TE77 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SSH3Q8TE77 LINC00265-3P-201ENST00000447588 903 ntBASIC22.22■■□□□ 1.15
SSH3Q8TE77 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC22.22■■□□□ 1.15
SSH3Q8TE77 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC22.22■■□□□ 1.15
SSH3Q8TE77 CDV3-207ENST00000508481 661 ntTSL 3 BASIC22.22■■□□□ 1.15
SSH3Q8TE77 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC22.22■■□□□ 1.15
SSH3Q8TE77 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC22.22■■□□□ 1.15
SSH3Q8TE77 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC22.22■■□□□ 1.15
SSH3Q8TE77 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
SSH3Q8TE77 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC22.22■■□□□ 1.15
SSH3Q8TE77 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SSH3Q8TE77 AC097374.2-201ENST00000618617 1306 ntBASIC22.22■■□□□ 1.15
SSH3Q8TE77 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SSH3Q8TE77 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
SSH3Q8TE77 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
SSH3Q8TE77 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SSH3Q8TE77 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SSH3Q8TE77 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
SSH3Q8TE77 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SSH3Q8TE77 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
SSH3Q8TE77 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SSH3Q8TE77 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SSH3Q8TE77 CD276-203ENST00000537340 2439 ntTSL 2 BASIC22.21■■□□□ 1.15
SSH3Q8TE77 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SSH3Q8TE77 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
SSH3Q8TE77 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SSH3Q8TE77 AC006116.8-202ENST00000587620 1550 ntBASIC22.21■■□□□ 1.15
SSH3Q8TE77 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
SSH3Q8TE77 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC22.21■■□□□ 1.15
SSH3Q8TE77 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
SSH3Q8TE77 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SSH3Q8TE77 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SSH3Q8TE77 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC22.21■■□□□ 1.15
SSH3Q8TE77 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC22.21■■□□□ 1.15
SSH3Q8TE77 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SSH3Q8TE77 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
SSH3Q8TE77 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SSH3Q8TE77 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SSH3Q8TE77 MED29-202ENST00000594368 1471 ntTSL 2 BASIC22.21■■□□□ 1.15
SSH3Q8TE77 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SSH3Q8TE77 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.15
SSH3Q8TE77 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
SSH3Q8TE77 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC22.2■■□□□ 1.15
SSH3Q8TE77 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC22.2■■□□□ 1.14
SSH3Q8TE77 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SSH3Q8TE77 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SSH3Q8TE77 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SSH3Q8TE77 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC22.2■■□□□ 1.14
SSH3Q8TE77 CCS-201ENST00000310190 942 ntTSL 5 BASIC22.2■■□□□ 1.14
SSH3Q8TE77 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
SSH3Q8TE77 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
SSH3Q8TE77 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
SSH3Q8TE77 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC22.2■■□□□ 1.14
SSH3Q8TE77 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC22.2■■□□□ 1.14
SSH3Q8TE77 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
SSH3Q8TE77 KRT17P6-201ENST00000453795 1220 ntBASIC22.2■■□□□ 1.14
SSH3Q8TE77 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC22.2■■□□□ 1.14
SSH3Q8TE77 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC22.2■■□□□ 1.14
SSH3Q8TE77 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC22.2■■□□□ 1.14
SSH3Q8TE77 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC22.2■■□□□ 1.14
SSH3Q8TE77 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC22.2■■□□□ 1.14
SSH3Q8TE77 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC22.2■■□□□ 1.14
SSH3Q8TE77 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC22.2■■□□□ 1.14
SSH3Q8TE77 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC22.2■■□□□ 1.14
SSH3Q8TE77 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC22.2■■□□□ 1.14
SSH3Q8TE77 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC22.2■■□□□ 1.14
SSH3Q8TE77 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC22.2■■□□□ 1.14
SSH3Q8TE77 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SSH3Q8TE77 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
SSH3Q8TE77 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC22.2■■□□□ 1.14
SSH3Q8TE77 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SSH3Q8TE77 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC22.2■■□□□ 1.14
SSH3Q8TE77 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
SSH3Q8TE77 AC009949.1-201ENST00000623048 1830 ntBASIC22.2■■□□□ 1.14
SSH3Q8TE77 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SSH3Q8TE77 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SSH3Q8TE77 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
SSH3Q8TE77 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
SSH3Q8TE77 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC22.19■■□□□ 1.14
SSH3Q8TE77 ABR-204ENST00000543210 1049 ntTSL 2 BASIC22.19■■□□□ 1.14
SSH3Q8TE77 ABR-217ENST00000572441 563 ntTSL 4 BASIC22.19■■□□□ 1.14
SSH3Q8TE77 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
SSH3Q8TE77 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SSH3Q8TE77 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
SSH3Q8TE77 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SSH3Q8TE77 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC22.19■■□□□ 1.14
SSH3Q8TE77 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
SSH3Q8TE77 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SSH3Q8TE77 GATB-213ENST00000515812 1893 ntTSL 5 BASIC22.19■■□□□ 1.14
SSH3Q8TE77 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SSH3Q8TE77 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SSH3Q8TE77 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms