Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC28.01■■■□□ 2.07
CFAP43Q8NDM7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CFAP43Q8NDM7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CFAP43Q8NDM7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CFAP43Q8NDM7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC28.01■■■□□ 2.07
CFAP43Q8NDM7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC28.01■■■□□ 2.07
CFAP43Q8NDM7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC28.01■■■□□ 2.07
CFAP43Q8NDM7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
CFAP43Q8NDM7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC28■■■□□ 2.07
CFAP43Q8NDM7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CFAP43Q8NDM7 ATP6V0CP3-201ENST00000417255 467 ntBASIC28■■■□□ 2.07
CFAP43Q8NDM7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC28■■■□□ 2.07
CFAP43Q8NDM7 AC007967.3-201ENST00000434308 558 ntBASIC28■■■□□ 2.07
CFAP43Q8NDM7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC28■■■□□ 2.07
CFAP43Q8NDM7 NKAPP1-205ENST00000585790 367 ntBASIC28■■■□□ 2.07
CFAP43Q8NDM7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
CFAP43Q8NDM7 TNXA-203ENST00000507684 2038 ntBASIC28■■■□□ 2.07
CFAP43Q8NDM7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
CFAP43Q8NDM7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CFAP43Q8NDM7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC28■■■□□ 2.07
CFAP43Q8NDM7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CFAP43Q8NDM7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
CFAP43Q8NDM7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
CFAP43Q8NDM7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC28■■■□□ 2.07
CFAP43Q8NDM7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CFAP43Q8NDM7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
CFAP43Q8NDM7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC28■■■□□ 2.07
CFAP43Q8NDM7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC28■■■□□ 2.07
CFAP43Q8NDM7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC28■■■□□ 2.07
CFAP43Q8NDM7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC28■■■□□ 2.07
CFAP43Q8NDM7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC28■■■□□ 2.07
CFAP43Q8NDM7 AC010460.3-201ENST00000511359 1579 ntBASIC27.99■■■□□ 2.07
CFAP43Q8NDM7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
CFAP43Q8NDM7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
CFAP43Q8NDM7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC27.99■■■□□ 2.07
CFAP43Q8NDM7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC27.99■■■□□ 2.07
CFAP43Q8NDM7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
CFAP43Q8NDM7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CFAP43Q8NDM7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
CFAP43Q8NDM7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
CFAP43Q8NDM7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC27.99■■■□□ 2.07
CFAP43Q8NDM7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC27.99■■■□□ 2.07
CFAP43Q8NDM7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC27.99■■■□□ 2.07
CFAP43Q8NDM7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CFAP43Q8NDM7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC27.99■■■□□ 2.07
CFAP43Q8NDM7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
CFAP43Q8NDM7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
CFAP43Q8NDM7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CFAP43Q8NDM7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
CFAP43Q8NDM7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
CFAP43Q8NDM7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
CFAP43Q8NDM7 AC093503.3-201ENST00000624917 2352 ntBASIC27.98■■■□□ 2.07
CFAP43Q8NDM7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
CFAP43Q8NDM7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
CFAP43Q8NDM7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
CFAP43Q8NDM7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC27.98■■■□□ 2.07
CFAP43Q8NDM7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC27.98■■■□□ 2.07
CFAP43Q8NDM7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC27.98■■■□□ 2.07
CFAP43Q8NDM7 AC239800.4-201ENST00000603712 296 ntBASIC27.98■■■□□ 2.07
CFAP43Q8NDM7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC27.98■■■□□ 2.07
CFAP43Q8NDM7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
CFAP43Q8NDM7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC27.98■■■□□ 2.07
CFAP43Q8NDM7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CFAP43Q8NDM7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
CFAP43Q8NDM7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC27.98■■■□□ 2.07
CFAP43Q8NDM7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
CFAP43Q8NDM7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
CFAP43Q8NDM7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC27.97■■■□□ 2.07
CFAP43Q8NDM7 AL645939.2-201ENST00000427340 991 ntBASIC27.97■■■□□ 2.07
CFAP43Q8NDM7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
CFAP43Q8NDM7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC27.97■■■□□ 2.07
CFAP43Q8NDM7 AC005829.1-201ENST00000570002 483 ntBASIC27.97■■■□□ 2.07
CFAP43Q8NDM7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC27.97■■■□□ 2.07
CFAP43Q8NDM7 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
CFAP43Q8NDM7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC27.97■■■□□ 2.07
CFAP43Q8NDM7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
CFAP43Q8NDM7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
CFAP43Q8NDM7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC27.97■■■□□ 2.07
CFAP43Q8NDM7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
CFAP43Q8NDM7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
CFAP43Q8NDM7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CFAP43Q8NDM7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC27.97■■■□□ 2.07
CFAP43Q8NDM7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CFAP43Q8NDM7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
CFAP43Q8NDM7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CFAP43Q8NDM7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CFAP43Q8NDM7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CFAP43Q8NDM7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC27.97■■■□□ 2.07
CFAP43Q8NDM7 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC27.97■■■□□ 2.07
CFAP43Q8NDM7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC27.97■■■□□ 2.07
CFAP43Q8NDM7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CFAP43Q8NDM7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC27.97■■■□□ 2.07
CFAP43Q8NDM7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CFAP43Q8NDM7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CFAP43Q8NDM7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC27.96■■■□□ 2.07
CFAP43Q8NDM7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC27.96■■■□□ 2.07
CFAP43Q8NDM7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
CFAP43Q8NDM7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC27.96■■■□□ 2.07
CFAP43Q8NDM7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
CFAP43Q8NDM7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC27.96■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms