Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 AC132938.6-201ENST00000623828 1655 ntBASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 GCSHP2-201ENST00000560971 527 ntBASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 AC012306.2-201ENST00000609350 630 ntBASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LSMEM1Q8N8F7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
LSMEM1Q8N8F7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
LSMEM1Q8N8F7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LSMEM1Q8N8F7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
LSMEM1Q8N8F7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LSMEM1Q8N8F7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LSMEM1Q8N8F7 AC006116.8-202ENST00000587620 1550 ntBASIC16.52■□□□□ 0.24
LSMEM1Q8N8F7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.52■□□□□ 0.24
LSMEM1Q8N8F7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LSMEM1Q8N8F7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LSMEM1Q8N8F7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LSMEM1Q8N8F7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.52■□□□□ 0.24
LSMEM1Q8N8F7 AC113404.2-201ENST00000507884 177 ntBASIC16.52■□□□□ 0.24
LSMEM1Q8N8F7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.52■□□□□ 0.24
LSMEM1Q8N8F7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
LSMEM1Q8N8F7 AC097493.4-201ENST00000641197 219 ntBASIC16.52■□□□□ 0.24
LSMEM1Q8N8F7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
LSMEM1Q8N8F7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LSMEM1Q8N8F7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
LSMEM1Q8N8F7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.52■□□□□ 0.23
LSMEM1Q8N8F7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LSMEM1Q8N8F7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
LSMEM1Q8N8F7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
LSMEM1Q8N8F7 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.52■□□□□ 0.23
LSMEM1Q8N8F7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
LSMEM1Q8N8F7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
LSMEM1Q8N8F7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.52■□□□□ 0.23
LSMEM1Q8N8F7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LSMEM1Q8N8F7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LSMEM1Q8N8F7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSMEM1Q8N8F7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LSMEM1Q8N8F7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LSMEM1Q8N8F7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSMEM1Q8N8F7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSMEM1Q8N8F7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSMEM1Q8N8F7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LSMEM1Q8N8F7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LSMEM1Q8N8F7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.51■□□□□ 0.23
LSMEM1Q8N8F7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSMEM1Q8N8F7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LSMEM1Q8N8F7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LSMEM1Q8N8F7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
LSMEM1Q8N8F7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSMEM1Q8N8F7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LSMEM1Q8N8F7 KRT89P-201ENST00000620027 1478 ntBASIC16.51■□□□□ 0.23
LSMEM1Q8N8F7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSMEM1Q8N8F7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LSMEM1Q8N8F7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.51■□□□□ 0.23
LSMEM1Q8N8F7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.51■□□□□ 0.23
LSMEM1Q8N8F7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.51■□□□□ 0.23
LSMEM1Q8N8F7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
LSMEM1Q8N8F7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.51■□□□□ 0.23
LSMEM1Q8N8F7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSMEM1Q8N8F7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
LSMEM1Q8N8F7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms