Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NME8Q8N427 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.82■□□□□ 0.76
NME8Q8N427 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NME8Q8N427 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NME8Q8N427 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
NME8Q8N427 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.82■□□□□ 0.76
NME8Q8N427 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NME8Q8N427 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NME8Q8N427 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NME8Q8N427 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NME8Q8N427 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NME8Q8N427 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NME8Q8N427 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NME8Q8N427 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.81■□□□□ 0.76
NME8Q8N427 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NME8Q8N427 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NME8Q8N427 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
NME8Q8N427 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.81■□□□□ 0.76
NME8Q8N427 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NME8Q8N427 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NME8Q8N427 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NME8Q8N427 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NME8Q8N427 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NME8Q8N427 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NME8Q8N427 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.81■□□□□ 0.76
NME8Q8N427 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NME8Q8N427 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.81■□□□□ 0.76
NME8Q8N427 RNA5SP419-201ENST00000515908 135 ntBASIC19.81■□□□□ 0.76
NME8Q8N427 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.81■□□□□ 0.76
NME8Q8N427 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.81■□□□□ 0.76
NME8Q8N427 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NME8Q8N427 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.81■□□□□ 0.76
NME8Q8N427 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NME8Q8N427 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NME8Q8N427 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.81■□□□□ 0.76
NME8Q8N427 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NME8Q8N427 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
NME8Q8N427 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NME8Q8N427 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
NME8Q8N427 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.81■□□□□ 0.76
NME8Q8N427 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
NME8Q8N427 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NME8Q8N427 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NME8Q8N427 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NME8Q8N427 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
NME8Q8N427 AC097374.2-201ENST00000618617 1306 ntBASIC19.8■□□□□ 0.76
NME8Q8N427 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NME8Q8N427 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.8■□□□□ 0.76
NME8Q8N427 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NME8Q8N427 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NME8Q8N427 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NME8Q8N427 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.8■□□□□ 0.76
NME8Q8N427 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
NME8Q8N427 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NME8Q8N427 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NME8Q8N427 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
NME8Q8N427 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
NME8Q8N427 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.8■□□□□ 0.76
NME8Q8N427 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.8■□□□□ 0.76
NME8Q8N427 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.8■□□□□ 0.76
NME8Q8N427 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
NME8Q8N427 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
NME8Q8N427 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.8■□□□□ 0.76
NME8Q8N427 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.8■□□□□ 0.76
NME8Q8N427 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NME8Q8N427 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.8■□□□□ 0.76
NME8Q8N427 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.8■□□□□ 0.76
NME8Q8N427 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.8■□□□□ 0.76
NME8Q8N427 MTDHP3-201ENST00000594186 672 ntBASIC19.8■□□□□ 0.76
NME8Q8N427 AP000974.1-201ENST00000623909 2387 ntBASIC19.8■□□□□ 0.76
NME8Q8N427 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.8■□□□□ 0.76
NME8Q8N427 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.8■□□□□ 0.76
NME8Q8N427 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.8■□□□□ 0.76
NME8Q8N427 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
NME8Q8N427 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.8■□□□□ 0.76
NME8Q8N427 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NME8Q8N427 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NME8Q8N427 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NME8Q8N427 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NME8Q8N427 AC005082.1-201ENST00000413042 2259 ntBASIC19.79■□□□□ 0.76
NME8Q8N427 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.79■□□□□ 0.76
NME8Q8N427 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NME8Q8N427 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.79■□□□□ 0.76
NME8Q8N427 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.79■□□□□ 0.76
NME8Q8N427 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NME8Q8N427 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NME8Q8N427 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NME8Q8N427 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NME8Q8N427 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.79■□□□□ 0.76
NME8Q8N427 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NME8Q8N427 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NME8Q8N427 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NME8Q8N427 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NME8Q8N427 LETM1P2-201ENST00000597330 2178 ntBASIC19.79■□□□□ 0.76
NME8Q8N427 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NME8Q8N427 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NME8Q8N427 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.79■□□□□ 0.76
NME8Q8N427 FGFR3P6-201ENST00000457012 610 ntBASIC19.79■□□□□ 0.76
NME8Q8N427 SCARNA2-201ENST00000458748 420 ntBASIC19.79■□□□□ 0.76
NME8Q8N427 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms