Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.93■□□□□ 0.3
CLIP4Q8N3C7 MIR4497-201ENST00000583208 89 ntBASIC16.93■□□□□ 0.3
CLIP4Q8N3C7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.93■□□□□ 0.3
CLIP4Q8N3C7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLIP4Q8N3C7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLIP4Q8N3C7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLIP4Q8N3C7 KRT8P9-201ENST00000558927 1449 ntBASIC16.93■□□□□ 0.3
CLIP4Q8N3C7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLIP4Q8N3C7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLIP4Q8N3C7 AC138028.4-201ENST00000564984 1845 ntBASIC16.93■□□□□ 0.3
CLIP4Q8N3C7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CLIP4Q8N3C7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.93■□□□□ 0.3
CLIP4Q8N3C7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLIP4Q8N3C7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLIP4Q8N3C7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLIP4Q8N3C7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLIP4Q8N3C7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLIP4Q8N3C7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLIP4Q8N3C7 CYP2D8P-201ENST00000433633 1490 ntBASIC16.93■□□□□ 0.3
CLIP4Q8N3C7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 PHGDH-209ENST00000641074 1780 ntBASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 AL096828.2-201ENST00000567259 1965 ntBASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 C2orf69P3-201ENST00000565542 1120 ntBASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP4Q8N3C7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CLIP4Q8N3C7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP4Q8N3C7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP4Q8N3C7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.91■□□□□ 0.3
CLIP4Q8N3C7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP4Q8N3C7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.91■□□□□ 0.3
CLIP4Q8N3C7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP4Q8N3C7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP4Q8N3C7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP4Q8N3C7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CLIP4Q8N3C7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP4Q8N3C7 TSPY14P-201ENST00000303979 915 ntBASIC16.91■□□□□ 0.3
CLIP4Q8N3C7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP4Q8N3C7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP4Q8N3C7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CLIP4Q8N3C7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.91■□□□□ 0.3
CLIP4Q8N3C7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP4Q8N3C7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP4Q8N3C7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP4Q8N3C7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.91■□□□□ 0.3
CLIP4Q8N3C7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.91■□□□□ 0.3
CLIP4Q8N3C7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CLIP4Q8N3C7 AC009102.3-201ENST00000623118 1491 ntBASIC16.91■□□□□ 0.3
CLIP4Q8N3C7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
CLIP4Q8N3C7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP4Q8N3C7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP4Q8N3C7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.91■□□□□ 0.3
CLIP4Q8N3C7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP4Q8N3C7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CLIP4Q8N3C7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.9■□□□□ 0.3
CLIP4Q8N3C7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLIP4Q8N3C7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLIP4Q8N3C7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.9■□□□□ 0.3
CLIP4Q8N3C7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLIP4Q8N3C7 AC018695.7-201ENST00000624587 2492 ntBASIC16.9■□□□□ 0.3
CLIP4Q8N3C7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.9■□□□□ 0.3
CLIP4Q8N3C7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.9■□□□□ 0.3
CLIP4Q8N3C7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.9■□□□□ 0.3
CLIP4Q8N3C7 KRT8P7-201ENST00000533003 1432 ntBASIC16.9■□□□□ 0.3
CLIP4Q8N3C7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms