Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 GRAMD4P1-201ENST00000435181 1110 ntBASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 MIR4674-201ENST00000582457 87 ntBASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 AC112497.1-201ENST00000624824 639 ntBASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 EML3-212ENST00000494176 2901 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 AL513477.1-201ENST00000602865 2407 ntBASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 ID1-201ENST00000376105 1233 ntBASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 AL353719.1-201ENST00000566847 864 ntBASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms