Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 AC140113.3-201ENST00000605663 199 ntBASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 AC010203.1-204ENST00000548782 407 ntBASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDKL3Q8IVW4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 RASA4DP-201ENST00000460726 1199 ntBASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 COX11P1-201ENST00000489116 835 ntBASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 AC113404.2-201ENST00000507884 177 ntBASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 AL031432.5-201ENST00000641059 760 ntBASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDKL3Q8IVW4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDKL3Q8IVW4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CDKL3Q8IVW4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDKL3Q8IVW4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDKL3Q8IVW4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
CDKL3Q8IVW4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDKL3Q8IVW4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.52■□□□□ 0.56
CDKL3Q8IVW4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.52■□□□□ 0.56
CDKL3Q8IVW4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDKL3Q8IVW4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.52■□□□□ 0.56
CDKL3Q8IVW4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDKL3Q8IVW4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDKL3Q8IVW4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDKL3Q8IVW4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CDKL3Q8IVW4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.52■□□□□ 0.56
CDKL3Q8IVW4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.52■□□□□ 0.56
CDKL3Q8IVW4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDKL3Q8IVW4 AC024563.2-201ENST00000603282 481 ntBASIC18.52■□□□□ 0.56
CDKL3Q8IVW4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms