Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CCDC50Q8IVM0 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CCDC50Q8IVM0 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 SLC25A6P5-201ENST00000435663 894 ntBASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 AC007663.1-201ENST00000438948 1240 ntBASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 TMEM191A-211ENST00000637163 1067 ntBASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 AP006294.2-201ENST00000641667 209 ntBASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 AL139384.1-201ENST00000612143 3047 ntBASIC19.06■□□□□ 0.64
CCDC50Q8IVM0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 OR6D1P-203ENST00000641209 4860 ntBASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 AL355075.4-201ENST00000554988 638 ntBASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 AC009065.1-201ENST00000564055 1225 ntBASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 AC112497.1-201ENST00000624824 639 ntBASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC50Q8IVM0 KRT17P2-201ENST00000300992 1314 ntBASIC19.04■□□□□ 0.64
CCDC50Q8IVM0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC50Q8IVM0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC50Q8IVM0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC50Q8IVM0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC50Q8IVM0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC50Q8IVM0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CCDC50Q8IVM0 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC50Q8IVM0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC50Q8IVM0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC50Q8IVM0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC50Q8IVM0 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC50Q8IVM0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC50Q8IVM0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CCDC50Q8IVM0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC50Q8IVM0 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC50Q8IVM0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CCDC50Q8IVM0 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC50Q8IVM0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC50Q8IVM0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms