Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 CYP2T1P-201ENST00000432607 1285 ntBASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 CNN2P6-201ENST00000439038 900 ntBASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
CROCCP3Q8IVE0 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 TUBB8P6-201ENST00000436895 1288 ntBASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 KRT18P16-201ENST00000510337 1294 ntBASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 AC005829.2-201ENST00000571422 1056 ntBASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 AL096828.2-201ENST00000567259 1965 ntBASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms