Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF135Q8IUD6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF135Q8IUD6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF135Q8IUD6 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF135Q8IUD6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF135Q8IUD6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF135Q8IUD6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF135Q8IUD6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF135Q8IUD6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.1■□□□□ 0.65
RNF135Q8IUD6 YBX2P1-201ENST00000394192 760 ntBASIC19.1■□□□□ 0.65
RNF135Q8IUD6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.1■□□□□ 0.65
RNF135Q8IUD6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF135Q8IUD6 AL591424.1-201ENST00000442569 1213 ntBASIC19.1■□□□□ 0.65
RNF135Q8IUD6 FGFR3P6-201ENST00000457012 610 ntBASIC19.1■□□□□ 0.65
RNF135Q8IUD6 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.1■□□□□ 0.65
RNF135Q8IUD6 MIR3197-201ENST00000582241 73 ntBASIC19.1■□□□□ 0.65
RNF135Q8IUD6 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF135Q8IUD6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.1■□□□□ 0.65
RNF135Q8IUD6 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF135Q8IUD6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF135Q8IUD6 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RNF135Q8IUD6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RNF135Q8IUD6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF135Q8IUD6 AL109659.2-201ENST00000606809 1674 ntBASIC19.1■□□□□ 0.65
RNF135Q8IUD6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF135Q8IUD6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF135Q8IUD6 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RNF135Q8IUD6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF135Q8IUD6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF135Q8IUD6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF135Q8IUD6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF135Q8IUD6 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF135Q8IUD6 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF135Q8IUD6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF135Q8IUD6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF135Q8IUD6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF135Q8IUD6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF135Q8IUD6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RNF135Q8IUD6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF135Q8IUD6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF135Q8IUD6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.09■□□□□ 0.65
RNF135Q8IUD6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF135Q8IUD6 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RNF135Q8IUD6 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF135Q8IUD6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF135Q8IUD6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.09■□□□□ 0.65
RNF135Q8IUD6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
RNF135Q8IUD6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF135Q8IUD6 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF135Q8IUD6 AC134684.3-201ENST00000641758 218 ntBASIC19.09■□□□□ 0.65
RNF135Q8IUD6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF135Q8IUD6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF135Q8IUD6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RNF135Q8IUD6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF135Q8IUD6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF135Q8IUD6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF135Q8IUD6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF135Q8IUD6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF135Q8IUD6 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
RNF135Q8IUD6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF135Q8IUD6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF135Q8IUD6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
RNF135Q8IUD6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF135Q8IUD6 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNF135Q8IUD6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.08■□□□□ 0.65
RNF135Q8IUD6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF135Q8IUD6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.08■□□□□ 0.65
RNF135Q8IUD6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
RNF135Q8IUD6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF135Q8IUD6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF135Q8IUD6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
RNF135Q8IUD6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNF135Q8IUD6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNF135Q8IUD6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF135Q8IUD6 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF135Q8IUD6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF135Q8IUD6 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.08■□□□□ 0.64
RNF135Q8IUD6 DNAJB3-201ENST00000446806 729 ntBASIC19.08■□□□□ 0.64
RNF135Q8IUD6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.64
RNF135Q8IUD6 MTDHP3-201ENST00000594186 672 ntBASIC19.08■□□□□ 0.64
RNF135Q8IUD6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.08■□□□□ 0.64
RNF135Q8IUD6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF135Q8IUD6 AC008556.1-201ENST00000610908 2040 ntBASIC19.08■□□□□ 0.64
RNF135Q8IUD6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF135Q8IUD6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF135Q8IUD6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.64
RNF135Q8IUD6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RNF135Q8IUD6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.08■□□□□ 0.64
RNF135Q8IUD6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF135Q8IUD6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RNF135Q8IUD6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF135Q8IUD6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RNF135Q8IUD6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF135Q8IUD6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF135Q8IUD6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF135Q8IUD6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF135Q8IUD6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RNF135Q8IUD6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF135Q8IUD6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF135Q8IUD6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms