Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.69■□□□□ 0.26
VRK2Q86Y07 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VRK2Q86Y07 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VRK2Q86Y07 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.69■□□□□ 0.26
VRK2Q86Y07 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
VRK2Q86Y07 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VRK2Q86Y07 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
VRK2Q86Y07 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VRK2Q86Y07 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
VRK2Q86Y07 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
VRK2Q86Y07 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.69■□□□□ 0.26
VRK2Q86Y07 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
VRK2Q86Y07 PVRIG2P-201ENST00000435460 978 ntBASIC16.69■□□□□ 0.26
VRK2Q86Y07 SLC25A3P1-201ENST00000443844 931 ntBASIC16.69■□□□□ 0.26
VRK2Q86Y07 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
VRK2Q86Y07 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
VRK2Q86Y07 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.69■□□□□ 0.26
VRK2Q86Y07 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
VRK2Q86Y07 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
VRK2Q86Y07 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
VRK2Q86Y07 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
VRK2Q86Y07 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.69■□□□□ 0.26
VRK2Q86Y07 AC100803.2-201ENST00000562459 1963 ntBASIC16.69■□□□□ 0.26
VRK2Q86Y07 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
VRK2Q86Y07 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VRK2Q86Y07 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VRK2Q86Y07 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.69■□□□□ 0.26
VRK2Q86Y07 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VRK2Q86Y07 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VRK2Q86Y07 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
VRK2Q86Y07 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
VRK2Q86Y07 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
VRK2Q86Y07 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
VRK2Q86Y07 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
VRK2Q86Y07 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VRK2Q86Y07 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.68■□□□□ 0.26
VRK2Q86Y07 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.68■□□□□ 0.26
VRK2Q86Y07 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VRK2Q86Y07 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VRK2Q86Y07 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VRK2Q86Y07 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.68■□□□□ 0.26
VRK2Q86Y07 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VRK2Q86Y07 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VRK2Q86Y07 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.68■□□□□ 0.26
VRK2Q86Y07 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.68■□□□□ 0.26
VRK2Q86Y07 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.68■□□□□ 0.26
VRK2Q86Y07 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.68■□□□□ 0.26
VRK2Q86Y07 AC010203.1-204ENST00000548782 407 ntBASIC16.68■□□□□ 0.26
VRK2Q86Y07 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.68■□□□□ 0.26
VRK2Q86Y07 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VRK2Q86Y07 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.68■□□□□ 0.26
VRK2Q86Y07 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.68■□□□□ 0.26
VRK2Q86Y07 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.68■□□□□ 0.26
VRK2Q86Y07 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VRK2Q86Y07 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VRK2Q86Y07 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VRK2Q86Y07 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.68■□□□□ 0.26
VRK2Q86Y07 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VRK2Q86Y07 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VRK2Q86Y07 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VRK2Q86Y07 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
VRK2Q86Y07 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
VRK2Q86Y07 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
VRK2Q86Y07 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VRK2Q86Y07 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
VRK2Q86Y07 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VRK2Q86Y07 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VRK2Q86Y07 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VRK2Q86Y07 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
VRK2Q86Y07 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
VRK2Q86Y07 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
VRK2Q86Y07 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VRK2Q86Y07 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
VRK2Q86Y07 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.67■□□□□ 0.26
VRK2Q86Y07 DUTP2-201ENST00000519164 463 ntBASIC16.67■□□□□ 0.26
VRK2Q86Y07 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
VRK2Q86Y07 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.67■□□□□ 0.26
VRK2Q86Y07 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.67■□□□□ 0.26
VRK2Q86Y07 LINC00167-201ENST00000530583 1419 ntBASIC16.67■□□□□ 0.26
VRK2Q86Y07 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
VRK2Q86Y07 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VRK2Q86Y07 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.67■□□□□ 0.26
VRK2Q86Y07 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VRK2Q86Y07 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VRK2Q86Y07 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VRK2Q86Y07 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VRK2Q86Y07 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
VRK2Q86Y07 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
VRK2Q86Y07 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.67■□□□□ 0.26
VRK2Q86Y07 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK2Q86Y07 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
VRK2Q86Y07 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK2Q86Y07 LINC00602-201ENST00000629776 2065 ntBASIC16.66■□□□□ 0.26
VRK2Q86Y07 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK2Q86Y07 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK2Q86Y07 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK2Q86Y07 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.66■□□□□ 0.26
VRK2Q86Y07 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
VRK2Q86Y07 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK2Q86Y07 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms