Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 KRT18P23-201ENST00000435622 1283 ntBASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 CA15P1-201ENST00000481698 905 ntBASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 AC100803.2-201ENST00000562459 1963 ntBASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.67■□□□□ 0.1
LRRTM1Q86UE6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 HLA-L-209ENST00000420110 1011 ntBASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 C1QBPP2-201ENST00000528754 825 ntBASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 SLC25A1P4-201ENST00000567977 778 ntBASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 DGCR10-201ENST00000609839 495 ntBASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 KRT8P7-201ENST00000533003 1432 ntBASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRTM1Q86UE6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 MIR935-201ENST00000401179 91 ntBASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 FAM197Y1-201ENST00000421178 764 ntBASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 AC090192.1-201ENST00000517740 490 ntBASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms