Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.02■□□□□ 0.48
LDB1Q86U70 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LDB1Q86U70 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LDB1Q86U70 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
LDB1Q86U70 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.47
LDB1Q86U70 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.02■□□□□ 0.47
LDB1Q86U70 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.02■□□□□ 0.47
LDB1Q86U70 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.02■□□□□ 0.47
LDB1Q86U70 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.02■□□□□ 0.47
LDB1Q86U70 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LDB1Q86U70 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LDB1Q86U70 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LDB1Q86U70 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LDB1Q86U70 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LDB1Q86U70 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.01■□□□□ 0.47
LDB1Q86U70 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LDB1Q86U70 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
LDB1Q86U70 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.01■□□□□ 0.47
LDB1Q86U70 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LDB1Q86U70 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LDB1Q86U70 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.01■□□□□ 0.47
LDB1Q86U70 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LDB1Q86U70 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LDB1Q86U70 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LDB1Q86U70 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
LDB1Q86U70 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LDB1Q86U70 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.01■□□□□ 0.47
LDB1Q86U70 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LDB1Q86U70 BCL2-203ENST00000589955 5011 ntBASIC18.01■□□□□ 0.47
LDB1Q86U70 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.01■□□□□ 0.47
LDB1Q86U70 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
LDB1Q86U70 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LDB1Q86U70 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LDB1Q86U70 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.01■□□□□ 0.47
LDB1Q86U70 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LDB1Q86U70 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LDB1Q86U70 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LDB1Q86U70 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18■□□□□ 0.47
LDB1Q86U70 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LDB1Q86U70 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LDB1Q86U70 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18■□□□□ 0.47
LDB1Q86U70 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18■□□□□ 0.47
LDB1Q86U70 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
LDB1Q86U70 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LDB1Q86U70 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18■□□□□ 0.47
LDB1Q86U70 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
LDB1Q86U70 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
LDB1Q86U70 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LDB1Q86U70 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18■□□□□ 0.47
LDB1Q86U70 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18■□□□□ 0.47
LDB1Q86U70 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18■□□□□ 0.47
LDB1Q86U70 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18■□□□□ 0.47
LDB1Q86U70 AC024563.2-201ENST00000603282 481 ntBASIC18■□□□□ 0.47
LDB1Q86U70 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
LDB1Q86U70 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18■□□□□ 0.47
LDB1Q86U70 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
LDB1Q86U70 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
LDB1Q86U70 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18■□□□□ 0.47
LDB1Q86U70 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18■□□□□ 0.47
LDB1Q86U70 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
LDB1Q86U70 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
LDB1Q86U70 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LDB1Q86U70 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
LDB1Q86U70 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LDB1Q86U70 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LDB1Q86U70 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LDB1Q86U70 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
LDB1Q86U70 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.99■□□□□ 0.47
LDB1Q86U70 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDB1Q86U70 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDB1Q86U70 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.99■□□□□ 0.47
LDB1Q86U70 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LDB1Q86U70 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LDB1Q86U70 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDB1Q86U70 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
LDB1Q86U70 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDB1Q86U70 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDB1Q86U70 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.99■□□□□ 0.47
LDB1Q86U70 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
LDB1Q86U70 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
LDB1Q86U70 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LDB1Q86U70 KRT18P21-201ENST00000515767 1272 ntBASIC17.99■□□□□ 0.47
LDB1Q86U70 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.99■□□□□ 0.47
LDB1Q86U70 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
LDB1Q86U70 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.99■□□□□ 0.47
LDB1Q86U70 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDB1Q86U70 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LDB1Q86U70 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDB1Q86U70 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDB1Q86U70 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDB1Q86U70 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDB1Q86U70 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.99■□□□□ 0.47
LDB1Q86U70 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LDB1Q86U70 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDB1Q86U70 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
LDB1Q86U70 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDB1Q86U70 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDB1Q86U70 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LDB1Q86U70 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.98■□□□□ 0.47
LDB1Q86U70 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms