Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
COPS6Q7L5N1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
COPS6Q7L5N1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC22.69■■□□□ 1.22
COPS6Q7L5N1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
COPS6Q7L5N1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC22.69■■□□□ 1.22
COPS6Q7L5N1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
COPS6Q7L5N1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
COPS6Q7L5N1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COPS6Q7L5N1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC22.69■■□□□ 1.22
COPS6Q7L5N1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COPS6Q7L5N1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COPS6Q7L5N1 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
COPS6Q7L5N1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC22.69■■□□□ 1.22
COPS6Q7L5N1 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
COPS6Q7L5N1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
COPS6Q7L5N1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
COPS6Q7L5N1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC22.69■■□□□ 1.22
COPS6Q7L5N1 FAM220CP-201ENST00000395253 831 ntBASIC22.69■■□□□ 1.22
COPS6Q7L5N1 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC22.69■■□□□ 1.22
COPS6Q7L5N1 AC021087.4-201ENST00000563761 564 ntBASIC22.69■■□□□ 1.22
COPS6Q7L5N1 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC22.69■■□□□ 1.22
COPS6Q7L5N1 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
COPS6Q7L5N1 ABBA01031661.1-201ENST00000634362 1253 ntBASIC22.69■■□□□ 1.22
COPS6Q7L5N1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
COPS6Q7L5N1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC22.69■■□□□ 1.22
COPS6Q7L5N1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COPS6Q7L5N1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
COPS6Q7L5N1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COPS6Q7L5N1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC22.69■■□□□ 1.22
COPS6Q7L5N1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COPS6Q7L5N1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
COPS6Q7L5N1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COPS6Q7L5N1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COPS6Q7L5N1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC22.68■■□□□ 1.22
COPS6Q7L5N1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
COPS6Q7L5N1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC22.68■■□□□ 1.22
COPS6Q7L5N1 AC243591.1-201ENST00000452967 1364 ntBASIC22.68■■□□□ 1.22
COPS6Q7L5N1 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COPS6Q7L5N1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC22.68■■□□□ 1.22
COPS6Q7L5N1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COPS6Q7L5N1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
COPS6Q7L5N1 SCARNA2-201ENST00000458748 420 ntBASIC22.68■■□□□ 1.22
COPS6Q7L5N1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC22.68■■□□□ 1.22
COPS6Q7L5N1 AC073648.2-201ENST00000510116 352 ntBASIC22.68■■□□□ 1.22
COPS6Q7L5N1 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC22.68■■□□□ 1.22
COPS6Q7L5N1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC22.68■■□□□ 1.22
COPS6Q7L5N1 FAM215A-202ENST00000632077 792 ntBASIC22.68■■□□□ 1.22
COPS6Q7L5N1 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
COPS6Q7L5N1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COPS6Q7L5N1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
COPS6Q7L5N1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
COPS6Q7L5N1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COPS6Q7L5N1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC22.67■■□□□ 1.22
COPS6Q7L5N1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COPS6Q7L5N1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COPS6Q7L5N1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC22.67■■□□□ 1.22
COPS6Q7L5N1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC22.67■■□□□ 1.22
COPS6Q7L5N1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC22.67■■□□□ 1.22
COPS6Q7L5N1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC22.67■■□□□ 1.22
COPS6Q7L5N1 SLC25A1P1-201ENST00000528351 927 ntBASIC22.67■■□□□ 1.22
COPS6Q7L5N1 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC22.67■■□□□ 1.22
COPS6Q7L5N1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC22.67■■□□□ 1.22
COPS6Q7L5N1 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC22.67■■□□□ 1.22
COPS6Q7L5N1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC22.67■■□□□ 1.22
COPS6Q7L5N1 AL671883.3-201ENST00000603274 991 ntBASIC22.67■■□□□ 1.22
COPS6Q7L5N1 MIR7706-201ENST00000613747 67 ntBASIC22.67■■□□□ 1.22
COPS6Q7L5N1 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC22.67■■□□□ 1.22
COPS6Q7L5N1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC22.67■■□□□ 1.22
COPS6Q7L5N1 AP000867.4-201ENST00000641616 219 ntBASIC22.67■■□□□ 1.22
COPS6Q7L5N1 AF228730.7-201ENST00000641842 219 ntBASIC22.67■■□□□ 1.22
COPS6Q7L5N1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC22.67■■□□□ 1.22
COPS6Q7L5N1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COPS6Q7L5N1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC22.67■■□□□ 1.22
COPS6Q7L5N1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
COPS6Q7L5N1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COPS6Q7L5N1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COPS6Q7L5N1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
COPS6Q7L5N1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
COPS6Q7L5N1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COPS6Q7L5N1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC22.66■■□□□ 1.22
COPS6Q7L5N1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
COPS6Q7L5N1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC22.66■■□□□ 1.22
COPS6Q7L5N1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
COPS6Q7L5N1 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COPS6Q7L5N1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC22.66■■□□□ 1.22
COPS6Q7L5N1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
COPS6Q7L5N1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
COPS6Q7L5N1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
COPS6Q7L5N1 SOD2-201ENST00000337404 991 ntTSL 2 BASIC22.66■■□□□ 1.22
COPS6Q7L5N1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
COPS6Q7L5N1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COPS6Q7L5N1 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC22.66■■□□□ 1.22
COPS6Q7L5N1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC22.66■■□□□ 1.22
COPS6Q7L5N1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC22.66■■□□□ 1.22
COPS6Q7L5N1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC22.66■■□□□ 1.22
COPS6Q7L5N1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
COPS6Q7L5N1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
COPS6Q7L5N1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COPS6Q7L5N1 POR-209ENST00000439269 1858 ntTSL 2 BASIC22.66■■□□□ 1.22
COPS6Q7L5N1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC22.66■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms