Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 BX664615.1-201ENST00000443558 458 ntBASIC18.24■□□□□ 0.51
PACS1Q6VY07 COX11P1-201ENST00000489116 835 ntBASIC18.24■□□□□ 0.51
PACS1Q6VY07 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.24■□□□□ 0.51
PACS1Q6VY07 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PACS1Q6VY07 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.24■□□□□ 0.51
PACS1Q6VY07 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.24■□□□□ 0.51
PACS1Q6VY07 AL031432.5-201ENST00000641059 760 ntBASIC18.24■□□□□ 0.51
PACS1Q6VY07 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.24■□□□□ 0.51
PACS1Q6VY07 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PACS1Q6VY07 HTR7P1-202ENST00000624664 4411 ntBASIC18.24■□□□□ 0.51
PACS1Q6VY07 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PACS1Q6VY07 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PACS1Q6VY07 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.24■□□□□ 0.51
PACS1Q6VY07 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PACS1Q6VY07 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PACS1Q6VY07 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PACS1Q6VY07 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PACS1Q6VY07 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PACS1Q6VY07 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.23■□□□□ 0.51
PACS1Q6VY07 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.23■□□□□ 0.51
PACS1Q6VY07 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PACS1Q6VY07 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PACS1Q6VY07 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PACS1Q6VY07 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PACS1Q6VY07 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PACS1Q6VY07 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PACS1Q6VY07 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PACS1Q6VY07 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.23■□□□□ 0.51
PACS1Q6VY07 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.23■□□□□ 0.51
PACS1Q6VY07 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PACS1Q6VY07 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.23■□□□□ 0.51
PACS1Q6VY07 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PACS1Q6VY07 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
PACS1Q6VY07 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.23■□□□□ 0.51
PACS1Q6VY07 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PACS1Q6VY07 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PACS1Q6VY07 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PACS1Q6VY07 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PACS1Q6VY07 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PACS1Q6VY07 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PACS1Q6VY07 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
PACS1Q6VY07 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PACS1Q6VY07 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.23■□□□□ 0.51
PACS1Q6VY07 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.23■□□□□ 0.51
PACS1Q6VY07 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.23■□□□□ 0.51
PACS1Q6VY07 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PACS1Q6VY07 AC092865.7-201ENST00000641832 219 ntBASIC18.23■□□□□ 0.51
PACS1Q6VY07 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.23■□□□□ 0.51
PACS1Q6VY07 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
PACS1Q6VY07 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PACS1Q6VY07 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PACS1Q6VY07 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PACS1Q6VY07 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.23■□□□□ 0.51
PACS1Q6VY07 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PACS1Q6VY07 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PACS1Q6VY07 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PACS1Q6VY07 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PACS1Q6VY07 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PACS1Q6VY07 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PACS1Q6VY07 KRT18P55-202ENST00000578578 1546 ntBASIC18.23■□□□□ 0.51
PACS1Q6VY07 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PACS1Q6VY07 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PACS1Q6VY07 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PACS1Q6VY07 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PACS1Q6VY07 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PACS1Q6VY07 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PACS1Q6VY07 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PACS1Q6VY07 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PACS1Q6VY07 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PACS1Q6VY07 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PACS1Q6VY07 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.22■□□□□ 0.51
PACS1Q6VY07 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PACS1Q6VY07 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PACS1Q6VY07 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PACS1Q6VY07 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.22■□□□□ 0.51
PACS1Q6VY07 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.22■□□□□ 0.51
PACS1Q6VY07 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.22■□□□□ 0.51
PACS1Q6VY07 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PACS1Q6VY07 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PACS1Q6VY07 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PACS1Q6VY07 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.22■□□□□ 0.51
PACS1Q6VY07 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PACS1Q6VY07 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PACS1Q6VY07 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PACS1Q6VY07 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PACS1Q6VY07 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.22■□□□□ 0.51
PACS1Q6VY07 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.22■□□□□ 0.51
PACS1Q6VY07 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.22■□□□□ 0.51
PACS1Q6VY07 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PACS1Q6VY07 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PACS1Q6VY07 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PACS1Q6VY07 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PACS1Q6VY07 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PACS1Q6VY07 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.21■□□□□ 0.51
PACS1Q6VY07 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PACS1Q6VY07 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PACS1Q6VY07 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PACS1Q6VY07 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
PACS1Q6VY07 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.21■□□□□ 0.51
PACS1Q6VY07 AL024508.2-201ENST00000607749 1894 ntBASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms