Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RFWD3Q6PCD5 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFWD3Q6PCD5 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFWD3Q6PCD5 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
RFWD3Q6PCD5 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RFWD3Q6PCD5 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.79■□□□□ 0.6
RFWD3Q6PCD5 AC092329.2-201ENST00000598402 547 ntBASIC18.79■□□□□ 0.6
RFWD3Q6PCD5 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.79■□□□□ 0.6
RFWD3Q6PCD5 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFWD3Q6PCD5 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RFWD3Q6PCD5 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFWD3Q6PCD5 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFWD3Q6PCD5 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.79■□□□□ 0.6
RFWD3Q6PCD5 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFWD3Q6PCD5 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RFWD3Q6PCD5 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFWD3Q6PCD5 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RFWD3Q6PCD5 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 AC073592.3-201ENST00000625118 1834 ntBASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 ESPNP-201ENST00000270691 2015 ntBASIC18.78■□□□□ 0.6
RFWD3Q6PCD5 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFWD3Q6PCD5 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
RFWD3Q6PCD5 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RFWD3Q6PCD5 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.77■□□□□ 0.6
RFWD3Q6PCD5 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFWD3Q6PCD5 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.77■□□□□ 0.6
RFWD3Q6PCD5 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.77■□□□□ 0.6
RFWD3Q6PCD5 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RFWD3Q6PCD5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFWD3Q6PCD5 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RFWD3Q6PCD5 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.77■□□□□ 0.6
RFWD3Q6PCD5 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.77■□□□□ 0.6
RFWD3Q6PCD5 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RFWD3Q6PCD5 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.77■□□□□ 0.6
RFWD3Q6PCD5 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.77■□□□□ 0.6
RFWD3Q6PCD5 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.77■□□□□ 0.6
RFWD3Q6PCD5 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
RFWD3Q6PCD5 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.77■□□□□ 0.6
RFWD3Q6PCD5 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.77■□□□□ 0.6
RFWD3Q6PCD5 IGHV3-41-201ENST00000613121 348 ntBASIC18.77■□□□□ 0.6
RFWD3Q6PCD5 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFWD3Q6PCD5 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFWD3Q6PCD5 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFWD3Q6PCD5 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RFWD3Q6PCD5 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RFWD3Q6PCD5 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RFWD3Q6PCD5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.77■□□□□ 0.59
RFWD3Q6PCD5 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RFWD3Q6PCD5 GMCL1P1-201ENST00000463439 1581 ntBASIC18.76■□□□□ 0.59
RFWD3Q6PCD5 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFWD3Q6PCD5 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFWD3Q6PCD5 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFWD3Q6PCD5 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFWD3Q6PCD5 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RFWD3Q6PCD5 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFWD3Q6PCD5 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFWD3Q6PCD5 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.76■□□□□ 0.59
RFWD3Q6PCD5 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.76■□□□□ 0.59
RFWD3Q6PCD5 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFWD3Q6PCD5 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RFWD3Q6PCD5 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RFWD3Q6PCD5 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.76■□□□□ 0.59
RFWD3Q6PCD5 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.76■□□□□ 0.59
RFWD3Q6PCD5 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.76■□□□□ 0.59
RFWD3Q6PCD5 CLEC4GP1-201ENST00000596555 870 ntBASIC18.76■□□□□ 0.59
RFWD3Q6PCD5 AC099398.1-201ENST00000567919 2776 ntBASIC18.76■□□□□ 0.59
RFWD3Q6PCD5 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFWD3Q6PCD5 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.76■□□□□ 0.59
RFWD3Q6PCD5 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFWD3Q6PCD5 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms